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scnpilot_solids2_trim150_scaffold_3240_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3240_curated_1
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..230)
DNA (228bp) protein (76aa)
alkylated DNA repair protein n=1 Tax=Pedobacter agri RepID=UPI00029AE822
Oxidoreductase, 2OG-Fe(II) oxygenase family protein {ECO:0000313|EMBL:EFK35753.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
2OG-Fe(II) oxygenase
scnpilot_solids2_trim150_scaffold_3240_curated_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(355..1158)
DNA (804bp) protein (268aa)
IstB domain protein ATP-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9X0_CHIPD
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:ACU57545.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_3240_curated_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1124..2677)
DNA (1554bp) protein (518aa)
Integrase catalytic region n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9W9_CHIPD
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACU57544.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_3240_curated_4
unknown

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comp(2921..3058)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3240_curated_5
unknown

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comp(3198..3407)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3240_curated_6
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3593..4489)
DNA (897bp) protein (299aa)
Glycosyltransferase family 2 n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DA27_9BACE
Glycosyltransferase family 2 {ECO:0000313|EMBL:CDA85318.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_3240_curated_7
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4660..5412)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6L0P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB75726.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
nucleotidyl transferase
scnpilot_solids2_trim150_scaffold_3240_curated_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5437..6228)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GXL0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA88328.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
lipooligosaccharide cholinephosphotransferase
scnpilot_solids2_trim150_scaffold_3240_curated_9
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(6218..7240)
DNA (1023bp) protein (341aa)
Putative transposase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U4J9_9CYAN
transposase
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids2_trim150_scaffold_3240_curated_10
unknown

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comp(7323..7412)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 10 items

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