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scnpilot_solids2_trim150_scaffold_733_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_733_curated_1
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

179..745
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003797D74
CarD family transcriptional regulator {ECO:0000313|EMBL:KEO72661.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_733_curated_2
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

799..1308
DNA (510bp) protein (170aa)
membrane protein n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AF4A
Membrane protein {ECO:0000313|EMBL:KJD36856.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_733_curated_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1557..5090
DNA (3534bp) protein (1178aa)
Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVW4_DYAFD
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO41421.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
signal transduction histidine kinase LytS
scnpilot_solids2_trim150_scaffold_733_curated_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5103..5852
DNA (750bp) protein (250aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W647_DYAFD
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT92527.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_733_curated_5
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6198..7922)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037323CD
Uncharacterized protein {ECO:0000313|EMBL:KIA85905.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_733_curated_6
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9128..9517)
DNA (390bp) protein (130aa)
Transposase n=1 Tax=planctomycete KSU-1 RepID=I3ILZ4_9PLAN
transposase IS200-family protein
Tax=CG_Ignavi_01
scnpilot_solids2_trim150_scaffold_733_curated_7
unknown

Not on your lists

comp(9839..10087)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_733_curated_8

Not on your lists

comp(10405..11982)
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D39B9
Uncharacterized protein {ECO:0000313|EMBL:KKN84084.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_733_curated_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12159..13829
DNA (1671bp) protein (557aa)
Putative uncharacterized protein id=3941258 bin=GWC2_Clostridiales_40_7 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
scnpilot_solids2_trim150_scaffold_733_curated_10
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14198..14971)
DNA (774bp) protein (258aa)
Methyltransferase type 11 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RUT9_METFO
Methyltransferase type 11 {ECO:0000313|EMBL:EKF86545.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
methyltransferase type 11
scnpilot_solids2_trim150_scaffold_733_curated_11
Bacillus sp. JCM 19045, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15189..15755)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Bacillus cereus RepID=J8SHE8_BACCE
Uncharacterized protein {ECO:0000313|EMBL:GAF11472.1}; TaxID=1460639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19045.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_733_curated_12
unknown

Not on your lists

comp(15890..16081)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_733_curated_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16467..18098
DNA (1632bp) protein (544aa)
Two-component system sensor histidine kinase/response regulator, hybrid n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KZG3_BACV8
two-component system sensor histidine kinase/response regulator, hybrid
Two-component system sensor histidine kinase/response regulator, hybrid {ECO:0000313|EMBL:ABR38827.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
scnpilot_solids2_trim150_scaffold_733_curated_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18193..18915
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037507CE
Uncharacterized protein {ECO:0000313|EMBL:KIC89160.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
signal transduction histidine kinase LytS
scnpilot_solids2_trim150_scaffold_733_curated_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18903..19670
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036272EE
Uncharacterized protein {ECO:0000313|EMBL:KIC89159.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
scnpilot_solids2_trim150_scaffold_733_curated_16
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20124..23522
DNA (3399bp) protein (1133aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NWG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR02769.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
HYR domain-containing protein
scnpilot_solids2_trim150_scaffold_733_curated_17
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23656..24069
DNA (414bp) protein (138aa)
Transposase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PQ9_CYTH3
transposase
Transposase {ECO:0000313|EMBL:ABG60604.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_solids2_trim150_scaffold_733_curated_18
unknown

Not on your lists

24240..24401
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_733_curated_19
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24658..25344
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0J882_9BACE
Contig99, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75471.1}; Flags: Fragment;; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
putative transposase
scnpilot_solids2_trim150_scaffold_733_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25324..25863)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMN0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03051.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_733_curated_21
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25888..26370)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IEM3_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44562.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_733_curated_22
unknown

Not on your lists

comp(27442..27828)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003696756
scnpilot_solids2_trim150_scaffold_733_curated_23
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(28149..28865)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377F1EF
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
scnpilot_solids2_trim150_scaffold_733_curated_24
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

Not on your lists

comp(29096..30904)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FB21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPT33196.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_733_curated_25
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30917..33589)
DNA (2673bp) protein (891aa)
id=3875726 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids2_trim150_scaffold_733_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33676..35367)
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EF602
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEV97409.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_733_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35437..37101
DNA (1665bp) protein (555aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI5_NIAKG
Peptidase M1 membrane alanine aminopeptidase
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AEV97408.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_733_curated_28
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37163..37879)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F442F
Uncharacterized protein {ECO:0000313|EMBL:KIC90151.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NLP/P60 protein; K13694 lipoprotein Spr
scnpilot_solids2_trim150_scaffold_733_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37961..41674
DNA (3714bp) protein (1238aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI0_NIAKG
scnpilot_solids2_trim150_scaffold_733_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41814..42134
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH9_NIAKG
thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 35 in total

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