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scnpilot_solids2_trim150_scaffold_794_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_794_curated_1
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
NodS-like protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0Q014_ELIME
NodS-like protein {ECO:0000313|EMBL:AKH93492.1}; TaxID=1352940 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica FMS-007.;"
type 12 methyltransferase
scnpilot_solids2_trim150_scaffold_794_curated_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

525..980
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC85_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:KIC94044.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_794_curated_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2400..3536)
DNA (1137bp) protein (379aa)
PepSY-associated TM helix domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMH0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89229.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PepSY-associated TM helix domain-containing protein
scnpilot_solids2_trim150_scaffold_794_curated_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3601..5964)
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003661455
Uncharacterized protein {ECO:0000313|EMBL:KIC89228.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor plug
scnpilot_solids2_trim150_scaffold_794_curated_5
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7169..8320)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVK2_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07424.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
scnpilot_solids2_trim150_scaffold_794_curated_6
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8462..10666)
DNA (2205bp) protein (735aa)
UPI00028938B9 related cluster id=3464937 bin=GWC1_Spirochaetes_27_15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
two-component system sensor histidine kinase/response
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_solids2_trim150_scaffold_794_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10670..11242)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000368585F
Uncharacterized protein {ECO:0000313|EMBL:KIC89835.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
acetyltransferase
scnpilot_solids2_trim150_scaffold_794_curated_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11520..12452
DNA (933bp) protein (311aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium botulinum F RepID=A7GC97_CLOBL
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABS40894.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
scnpilot_solids2_trim150_scaffold_794_curated_9
unknown

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comp(12622..12879)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_794_curated_10
unknown

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13162..13512
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_794_curated_11
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13558..14919)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNS9_SOLCM
hypothetical protein (DUF3738)/Redoxin
Uncharacterized protein {ECO:0000313|EMBL:AFD05340.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_794_curated_12
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14947..16332)
DNA (1386bp) protein (462aa)
RagB/SusD domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1R2_PEDHD
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACU05054.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_794_curated_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16342..19671)
DNA (3330bp) protein (1110aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1R1_PEDHD
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU05053.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
TonB-dependent receptor plug
scnpilot_solids2_trim150_scaffold_794_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19892..21148)
DNA (1257bp) protein (419aa)
Putative anti-sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHU1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AKD57008.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
FecR protein
scnpilot_solids2_trim150_scaffold_794_curated_15
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

21619..22836
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RWZ2_LEAB4
Uncharacterized protein {ECO:0000313|EMBL:KIM09722.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_794_curated_16
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22931..23515)
DNA (585bp) protein (195aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FDF7_9PORP
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB06966.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_solids2_trim150_scaffold_794_curated_17
unknown

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comp(24604..24729)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 17 items

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