ggKbase home page

scnpilot_solids2_trim150_scaffold_246_curated_15

Organism: solids_Sphingobacteriales_3

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 11329..13575

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR8_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 735.0
  • Bit_score: 549
  • Evalue 5.50e-153
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 735.0
  • Bit_score: 549
  • Evalue 1.70e-153
TonB-dependent receptor {ECO:0000313|EMBL:AEI51959.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 735.0
  • Bit_score: 549
  • Evalue 7.70e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2247
ATGAGAGCAATCGGATTTATCCTTGCCACGGTATTGACTTCAGTCGCCGTGTATGGACAAACAAATACACCAGCGCAGGATTCTGTAATCAAGGTAACTGTTTTACAGGACGTGATTGTTACGACCAGCCGTTTGAAATTAAGGAAGAAACAGGTACCTCAAAAGTTGGAGATAATAACCGGCAAAGACATCGCAATGAGTTCCGGTTTAGATGTTGGCGATATTATAAAAAAAATGAGCGCCTTAGATGTAATACAAAGACCAGGGGTAGCAACTTATGCCACAATCAGGGGGTTTCGTCCACCGGTAGAACCCGGCAGAATAAATCCCGAAGTTTCTGTTTTACTAAATGGCAGGCAGTCAGGAACTCAAAACCTTGCATTGTTTGATCCTAACAGCATTGAGCGCATTGAAGTTCTAAAAGGTGCTGCAGGCGCTGTTTATGGAAGCAGTACCATGGGAGGAGTCATCAATATTATTACAAAACAAACCAAAGGAAAAGTAACCGGAAATGTATTTGGAGGATATGGTTCTTTTGAAACTTCAGAAATGGGCTATGCTGTTGGCGGGAATATTTTACCAAAGCTTGACTTTGATTTTTCCGGGACATTTTTTGACAGAAATGAGGGTTTCCGAACCGGGAAGGATAATTTATTCAGAAAAATATTGGGCAGTGAGCAGGCTGCATTATTTCCGGTTTCGGGAATGGTTAAAGAATATGATACCGCTTTTGATGGAAGAAAAAGAAACGGTACAAAAATGGGGTATCGTACCAACAGCCTTCGTATTGGATACCAGATCAGTGATAACTGGCGGGTGGATGTAAGCGGTCATTCATTTTCCGGCCGCGGTATCGAAAGCTCCGGCGACCTGAGATTAATAGATGCGGCGCAGGGTCATGCCGATCGCTTTTTTAATAATGGCGATGTAAGCATTGCAGGGCATCTTAAAAAACATAGCCTTTCATTAAAGGCGTTTTTAACCCACGAAGAAAACAGCACTTTTAATCATTATAATGGTTCCACTTTTAATTTACTTACACTAACACCGTCTCCAACTTACCAGGTATCGGAAGGTATTGTGAAATGGAAAGGCTTTCAATTGCAGGATGCTGTTAAAGTGAATGAACAAATAACAATCCTTACCGGTATAGATTATAGTGAAGCTACCTCGAAGGCAAAGGCATGGAACCAGTCCAATGCAACTGCCGGTTTTGAGGTAACGGCCCGTTCGCCGTATTCCCCTTATTCTTTTGTAAAAACCTTTGCACCGTTTGCGCAGGCGCATATAACAGCATTAAAGGACAAACTCATTATCAATCCGGGTATCCGTTATGATTTTATTCGTTTTGGAATTCTTGAAACGCCTTTGTTTTTAAACCTGACTCCTAAAAAAGCGAATAATACCTTTTTAAGTCCCAGCCTTGCCCTGCAGTACAATATAAATATTGATTGGGCGGTACATTCTAATATTGGCCGGGCTTTTCGTTTCGCACAGGCATTTGAAGTGGCGGGATACATTGAAACCTATTTTCCCGGAAATACAGTACGCATCAGCACAGGCAATCCAAGCCTGAAAAATGAAGAAAGCCTAACCGGCGATGTCGGAATAAAATACAGCAGCAATAGACATGGATTGAGTTTAGACGCCACCTACTTTAATACCAGGGTAACCAACCGTATCCGCCAGGTACCGGTACCGGATAAAGTTGGACAAATCCATAGCAACGAAATGGTCATAGATCAGTATCTGACCTATGATAATGCCGATGAAGCGAAAATACAGGGGTTGGAACTGGAGGGTAGTTATGATTTCGGCTCATTGAGCAATAATAAACATGGTTTAAGGGTATTTGTTAATATGACGCATTTGATAAAAGCGGAAGATTATACAAATGGCAAAGGACTGATACCCGATGCCACTGTAAGAATTAGAAATGTAGCACCGCTAAATATGGGCTATGGCATAGAATATGATAACCGCCGGTGCATTGCAGTAAGACTGAGTGGCAGGTATATAAGCAAGCGTTACGCTCAGGATTTCGGAAATCTTACGCCTGTTTTAAGAGGGGCGTACATGGAGTATCCGAAATATATGGTATTAGATTTAACGACCAGTTATACGATTGCGGGGCAACATGTATTATCCTTAAGGATCAGCAATCTTACGGATGAGAATTACTACGAAACCCGCGGTTTTAATCTGCCCGGACGCTTCACCGGTCTCCGATACACGTACCAGTTTTAA
PROTEIN sequence
Length: 749
MRAIGFILATVLTSVAVYGQTNTPAQDSVIKVTVLQDVIVTTSRLKLRKKQVPQKLEIITGKDIAMSSGLDVGDIIKKMSALDVIQRPGVATYATIRGFRPPVEPGRINPEVSVLLNGRQSGTQNLALFDPNSIERIEVLKGAAGAVYGSSTMGGVINIITKQTKGKVTGNVFGGYGSFETSEMGYAVGGNILPKLDFDFSGTFFDRNEGFRTGKDNLFRKILGSEQAALFPVSGMVKEYDTAFDGRKRNGTKMGYRTNSLRIGYQISDNWRVDVSGHSFSGRGIESSGDLRLIDAAQGHADRFFNNGDVSIAGHLKKHSLSLKAFLTHEENSTFNHYNGSTFNLLTLTPSPTYQVSEGIVKWKGFQLQDAVKVNEQITILTGIDYSEATSKAKAWNQSNATAGFEVTARSPYSPYSFVKTFAPFAQAHITALKDKLIINPGIRYDFIRFGILETPLFLNLTPKKANNTFLSPSLALQYNINIDWAVHSNIGRAFRFAQAFEVAGYIETYFPGNTVRISTGNPSLKNEESLTGDVGIKYSSNRHGLSLDATYFNTRVTNRIRQVPVPDKVGQIHSNEMVIDQYLTYDNADEAKIQGLELEGSYDFGSLSNNKHGLRVFVNMTHLIKAEDYTNGKGLIPDATVRIRNVAPLNMGYGIEYDNRRCIAVRLSGRYISKRYAQDFGNLTPVLRGAYMEYPKYMVLDLTTSYTIAGQHVLSLRISNLTDENYYETRGFNLPGRFTGLRYTYQF*