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scnpilot_solids2_trim150_scaffold_246_curated

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_246_curated_1
RIFOXYB2_FULL_PER_ii_54_17_curated, PER-ii, Bacteria

Not on your lists

272..1090
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J912_9ALTE
putative nuclease of the RecB family
Tax=RIFOXYB2_FULL_PER_ii_54_17_curated
scnpilot_solids2_trim150_scaffold_246_curated_2
unknown

Not on your lists

1697..2161
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_246_curated_3
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2227..3321
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366EF21
hypothetical protein
Tax=RBG_13_Bacteroidetes_42_15_curated
scnpilot_solids2_trim150_scaffold_246_curated_4
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

3481..3924
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=4035625 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
scnpilot_solids2_trim150_scaffold_246_curated_5
unknown

Not on your lists

comp(4454..4561)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_246_curated_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4634..5245)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E72B9
Uncharacterized protein {ECO:0000313|EMBL:AHM58702.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_246_curated_7
unknown

Not on your lists

comp(5336..5587)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_246_curated_8
unknown

Not on your lists

5639..5776
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_246_curated_9
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6563..7510)
DNA (948bp) protein (316aa)
Transcriptional regulator, AraC family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S687_PEDSD
AraC family transcriptional regulator {ECO:0000313|EMBL:AHM58699.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_246_curated_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7844..8782
DNA (939bp) protein (313aa)
Phospholipase/Carboxylesterase id=5024964 bin=GWA2_Bacteroidetes_42_15 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
phospholipase/Carboxylesterase; K03932 polyhydroxybutyrate depolymerase
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_246_curated_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8809..9639)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003663EA9
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AEI52228.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_246_curated_12
unknown

Not on your lists

comp(9786..10031)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_246_curated_13
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10148..10372)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003480509
Uncharacterized protein {ECO:0000313|EMBL:EJG00609.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_246_curated_14
unknown

Not on your lists

11167..11322
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_246_curated_15
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11329..13575
DNA (2247bp) protein (749aa)
TonB-dependent receptor n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR8_RUNSL
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:AEI51959.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_246_curated_16
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13638..14204
DNA (567bp) protein (189aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR6_RUNSL
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AEI51957.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_246_curated_17
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14247..14594
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR5_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51956.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_246_curated_18
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14581..18450
DNA (3870bp) protein (1290aa)
Magnesium chelatase (EC:6.6.1.1); K02230 cobaltochelatase CobN [EC:6.6.1.2]
Magnesium chelatase {ECO:0000313|EMBL:AEI51955.1}; EC=6.6.1.1 {ECO:0000313|EMBL:AEI51955.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Magnesium chelatase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQR4_RUNSL
scnpilot_solids2_trim150_scaffold_246_curated_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18683..20836)
DNA (2154bp) protein (718aa)
cytochrome C n=1 Tax=Dyadobacter beijingensis RepID=UPI0003806EA3
cytochrome C
Planctomycete cytochrome C {ECO:0000313|EMBL:ACT93199.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_246_curated_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20961..22415)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW68_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93200.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_246_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22594..24918)
DNA (2325bp) protein (775aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW69_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93201.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_246_curated_22
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25230..28055)
DNA (2826bp) protein (942aa)
alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40]
Alpha-L-rhamnosidase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEP1_9SPHI
Tax=RBG_16_Planctomycetes_64_12_curated
scnpilot_solids2_trim150_scaffold_246_curated_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28204..29751)
DNA (1548bp) protein (516aa)
RagB/SusD domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN6_DYAFD
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT93514.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_246_curated_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29775..32858)
DNA (3084bp) protein (1028aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZN5_DYAFD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT93513.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_246_curated_25
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33061..33879)
DNA (819bp) protein (273aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
Uncharacterized protein {ECO:0000313|EMBL:CDX33903.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_246_curated_26
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33885..34637)
DNA (753bp) protein (251aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Schlesneria paludicola RepID=UPI00029A683C
Uncharacterized protein {ECO:0000313|EMBL:ERP86128.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
alpha-dehydro-beta-deoxy-D-glucarate aldolase
scnpilot_solids2_trim150_scaffold_246_curated_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(34634..35494)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DB57E
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB50360.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_246_curated_28
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35494..36291)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003645ED5
Uncharacterized protein {ECO:0000313|EMBL:EJS65750.1}; TaxID=1053179 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-1.;"
Short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_246_curated_29
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(36366..38063)
DNA (1698bp) protein (566aa)
Alpha-L-rhamnosidase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU7_9BACT
alpha-L-rhamnosidase family protein
Tax=RBG_16_Planctomycetes_64_10_curated
scnpilot_solids2_trim150_scaffold_246_curated_30
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38104..39579)
DNA (1476bp) protein (492aa)
Aldehyde Dehydrogenase; K07248 lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
Aldehyde dehydrogenase A, NAD-linked n=1 Tax=unidentified eubacterium SCB49 RepID=A6EN91_9BACT
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJD36003.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
Displaying items 1-30 of 52 in total

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