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scnpilot_solids2_trim150_scaffold_129_curated

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_129_curated_1
unknown

Not on your lists

2..856
DNA (855bp) protein (285aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_129_curated_2
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1152..2570
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0003191287
Uncharacterized protein {ECO:0000313|EMBL:EJU09519.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_129_curated_3
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2728..4212
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PV85_9ZZZZ
polysaccharide biosynthesis protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_129_curated_4
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4237..5019
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTF8_THIA3
Uncharacterized protein {ECO:0000313|EMBL:GAN45524.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
conserved hypothetical protein; putative exported protein
scnpilot_solids2_trim150_scaffold_129_curated_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..6282
DNA (1191bp) protein (397aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037B71FC
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KGI78504.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
scnpilot_solids2_trim150_scaffold_129_curated_6
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

6279..7478
DNA (1200bp) protein (400aa)
Glycosyl transferase, group 1 id=3887280 bin=GWF2_Ignavibacteria_33_9 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
group 1 glycosyl transferase
Tax=GWF2_RIF_IGX_33_9_curated
scnpilot_solids2_trim150_scaffold_129_curated_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..8606
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3J737_NITOC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_solids2_trim150_scaffold_129_curated_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8668..9792)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003689C87
Family 2 glycosyl transferase {ECO:0000313|EMBL:EIL91335.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_129_curated_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9789..10559)
DNA (771bp) protein (257aa)
Putative Polysaccharide deacetylase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTF3_THIA3
putative Polysaccharide deacetylase
Putative Polysaccharide deacetylase {ECO:0000313|EMBL:CAZ88572.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scnpilot_solids2_trim150_scaffold_129_curated_10
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10552..11967)
DNA (1416bp) protein (472aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM51880.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
Predicted O-antigen polymerase id=1717539 bin=GWB2_Clostridiales_37_7 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
O-antigen polymerase
scnpilot_solids2_trim150_scaffold_129_curated_11
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(11948..13078)
DNA (1131bp) protein (377aa)
Glycosyltransferase, YqgM-like family n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39U44_GEOMG
group 1 glycosyl transferase
Tax=RBG_13_Nitrospirae_43_8_curated
scnpilot_solids2_trim150_scaffold_129_curated_12
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(13068..14204)
DNA (1137bp) protein (379aa)
Glycosyl transferase, group 1 id=4474496 bin=GWC2_OP3-like_45_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
putative glycosyl transferase, group 1
Tax=GWA2_WOR_2_45_18_curated
scnpilot_solids2_trim150_scaffold_129_curated_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14245..15672)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349D875
Uncharacterized protein {ECO:0000313|EMBL:EIL91319.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_129_curated_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15694..16464)
DNA (771bp) protein (257aa)
Protein-tyrosine kinase, Exopolysaccharide biosynthesis (EC:2.7.10.2)
Polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS7_9GAMM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL91318.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_129_curated_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16461..18050)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91317.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_129_curated_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18073..18693)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A7E05
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHX13683.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
polysaccharide biosynthesis/export protein; K01991 polysaccharide export outer membrane protein
scnpilot_solids2_trim150_scaffold_129_curated_17
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18795..19802)
DNA (1008bp) protein (336aa)
Capsular polysaccharide biosynthesis protein I; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z405_9GAMM
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_129_curated_18
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19981..21273)
DNA (1293bp) protein (431aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SIM5_HAHCH
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_129_curated_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21318..22205)
DNA (888bp) protein (296aa)
Integral membrane protein DUF6 (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZML8_9ZZZZ
Permease {ECO:0000313|EMBL:GAN45738.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative permease, DMT superfamily
scnpilot_solids2_trim150_scaffold_129_curated_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22270..23340
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C7B36
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_129_curated_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23359..24243)
DNA (885bp) protein (295aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.197 {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581};; Biotin synthesis protein BioC {ECO:0000256|HAMAP-Rule:MF_00835}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Malonyl-[acyl-carrier protein] O-methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA04_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_solids2_trim150_scaffold_129_curated_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24240..25016)
DNA (777bp) protein (259aa)
Pimeloyl-[acyl-carrier protein] methyl ester esterase {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064125}; EC=3.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064111};; Biotin synthesis protein BioH {ECO:0000256|HAMAP-Rule:MF_01260}; Carboxylesterase BioH {ECO:0000256|HAMAP-Rule:MF_01260}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Pimelyl-[acyl-carrier protein] methyl ester esterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXW4_9GAMM
carboxylesterase BioH (pimeloyl-CoA synthesis)
scnpilot_solids2_trim150_scaffold_129_curated_23
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25054..26382)
DNA (1329bp) protein (443aa)
8-amino-7-oxononanoate synthase {ECO:0000256|HAMAP-Rule:MF_01693, ECO:0000256|SAAS:SAAS00016811}; Short=AONS {ECO:0000256|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000256|HAMAP-Rule:MF_01693, ECO:0000256|SAAS:SAAS00087543};; 7-keto-8-amino-pelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_01693}; 8-amino-7-ketopelargonate synthase {ECO:0000256|HAMAP-Rule:MF_01693}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensi
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase n=1 Tax=Dyella japonica RepID=UPI0003121021
scnpilot_solids2_trim150_scaffold_129_curated_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26382..27422)
DNA (1041bp) protein (347aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJA7_9GAMM
scnpilot_solids2_trim150_scaffold_129_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27475..28194
DNA (720bp) protein (240aa)
Putative amidophosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTA9_9GAMM
putative amidophosphoribosyltransferase
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:AGG90726.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_129_curated_26
unknown

Not on your lists

comp(28220..28594)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_129_curated_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28648..29703)
DNA (1056bp) protein (352aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQV3_9GAMM
scnpilot_solids2_trim150_scaffold_129_curated_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29958..31445
DNA (1488bp) protein (496aa)
Amino acid transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQT4_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EIL89575.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
amino acid transporter
scnpilot_solids2_trim150_scaffold_129_curated_29
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31884..32582
DNA (699bp) protein (233aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030785A7
Glutathione S-transferase {ECO:0000313|EMBL:AKC86912.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids2_trim150_scaffold_129_curated_30
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32670..34634
DNA (1965bp) protein (655aa)
peptidase M61 n=1 Tax=Dyella ginsengisoli RepID=UPI0003478FE3
Peptidase M61 {ECO:0000313|EMBL:KGI78409.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
glycyl aminopeptidase
Displaying items 1-30 of 86 in total

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