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scnpilot_solids2_trim150_scaffold_80_curated_10

Organism: solids_Xanthomonadales_1

near complete RP 46 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: 9372..10325

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 315.0
  • Bit_score: 404
  • Evalue 1.00e-109
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 313.0
  • Bit_score: 393
  • Evalue 5.10e-107
Pseudouridine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAJ2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 315.0
  • Bit_score: 404
  • Evalue 7.10e-110

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
GTGACTGAACGATTCCGCAGCGAAGTCCCCGCCGACCTGGCCGGGCAACGCTTCGACCAGATCCTGCCGCAGTTGTTCCATGGCCATTCGCGCGCGCGCCTCGCCGCCGAGGTCAAGGCCGGGCGGATCACCCTGGATGGCCGGAAAACCGTGCCCCGCACGCTGGTGCGCGGCGGCGAGGCCGTGGAGTGGGAGCAGGCCGGGGAGCCGGCGCTGGATGATCGCCCCGAACCCATCGGGCTCGCCATCGTGCACGAGGATGCCGACCTGCTGGTGATCGACAAGCCGGCCGGGCTGGTGGTGCATCCCGGTGCGGGCAACCGCGACGGGACCCTGTTGAATGCGCTGCTGCACCACGATCCGGGCCTCGCGCGGGTGCCGCGCGCGGGCATCGTGCATCGCCTCGACAAGGACACCTCGGGCTTGCTGGTGGTGGCGCGTTCGCTGCCCGCGCATACCGCGCTGGTGGCGATGCTGGCGGCGCGCGACGTGCATCGCCGCTACGCCGCGATCGTCAACGGCGTGTCGGTGGCGGGGGGCAGCGTGGACGCACCGCTCGACCGGCATCCGTCCGATCGACTGCGGCGTGCGGTGCGCGAAGGCGGTCGACCTGCCGTCACGCACTACCGCGTGCGCGAGAAATTTCGCGCGCAGGCGTTGCTGCAATGCGAGCTGGAGTCCGGGCGCACCCATCAGATCCGCGTGCACATGGCGCACGCGGGCTATCCTCTCGTGGGCGATCCGTTGTACGGGAAGGGATTGAGGTTGCCGCGCGGCGCGATGCCGGAACTCGCGGAGGCGCTGCGCGGATTCAGGCGGCAGGCCCTGCACGCCGAGCACCTGGCGTTCGCGCATCCGGTTTCGGGCGAGGCATTGGCGTTCGATGCCGAGCCGCCGCGGGATTTCCTGGACCTATTGAACGCACTGCGCAAAGATGCCACCGCGAGGGATTGA
PROTEIN sequence
Length: 318
VTERFRSEVPADLAGQRFDQILPQLFHGHSRARLAAEVKAGRITLDGRKTVPRTLVRGGEAVEWEQAGEPALDDRPEPIGLAIVHEDADLLVIDKPAGLVVHPGAGNRDGTLLNALLHHDPGLARVPRAGIVHRLDKDTSGLLVVARSLPAHTALVAMLAARDVHRRYAAIVNGVSVAGGSVDAPLDRHPSDRLRRAVREGGRPAVTHYRVREKFRAQALLQCELESGRTHQIRVHMAHAGYPLVGDPLYGKGLRLPRGAMPELAEALRGFRRQALHAEHLAFAHPVSGEALAFDAEPPRDFLDLLNALRKDATARD*