name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
AMDSBA3_55_1
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
|
Not on your lists |
343..1209
|
IS1595 transposase, IS1595 family n=4 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7T9L0_9XANT (db=UNIREF evalue=6.9e-31 bit_score=140.2 identity=35.3 coverage=96.19377162629758)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
ISXO2-like transposase domain protein {ECO:0000313|EMBL:KJF18784.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidith
Putative uncharacterized protein n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4H8_9BACT
|
|
AMDSBA3_55_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
1642..2502
|
qoxA; quinol oxidase subunit 2
Cytochrome bo3 quinol oxidase subunit 2 n=3 Tax=Acidiphilium RepID=A5FXH9_ACICJ (db=UNIREF evalue=5.8e-30 bit_score=137.1 identity=31.2 coverage=95.47038327526133)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
seg (db=Seg db_id=seg from=41 to=53)
|
orphan in network
Nicholas Justice
(1/17/13)
|
AMDSBA3_55_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
2525..4504
|
qoxB; cytochrome C oxidase
qoxB; cytochrome C oxidase
Cytochrome c oxidase polypeptide 1 n=2 Tax=Halobacterium salinarum RepID=COX1_HALSA (db=UNIREF evalue=3.7e-104 bit_score=384.8 identity=41.0 coverage=72.87878787878788)
|
|
AMDSBA3_55_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
4501..5097
|
cyoC; cytochrome aa3 quinol oxidase subunit III
Cytochrome c oxidase subunit 3 n=9 Tax=Bacillaceae RepID=COX3_BACP3 (db=UNIREF evalue=4.7e-39 bit_score=166.8 identity=42.8 coverage=89.9497487437186)
transmembrane_regions (db=TMHMM db_id=tmhmm from=132 to=154)
seg (db=Seg db_id=seg from=64 to=82)
|
|
AMDSBA3_55_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
5119..5493
|
seg (db=Seg db_id=seg from=41 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
|
|
AMDSBA3_55_6
unknown
|
Not on your lists |
comp(5490..5837)
|
seg (db=Seg db_id=seg from=38 to=56)
seg (db=Seg db_id=seg from=4 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
|
|
AMDSBA3_55_7
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(6123..6791)
|
paiB; protease synthase and sporulation protein
Negative transcriptional regulator n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JV01_9RHOB (db=UNIREF evalue=5.1e-18 bit_score=97.1 identity=29.3 coverage=86.54708520179372)
(db=HMMPfam db_id=PF04299 from=12 to=173 evalue=5.8e-51 interpro_id=IPR007396 interpro_description=Negative transcriptional regulator)
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=12 to=197 evalue=7.2e-37 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
|
|
AMDSBA3_55_8
unknown
|
Not on your lists |
7246..7377
|
7246..7377 + ( gc_cont=0.553)
|
|
AMDSBA3_55_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria
|
Not on your lists |
7618..7842
|
YgiT_finger: YgiT-type zinc finger domain (db=HMMTigr db_id=TIGR03831 from=1 to=45 evalue=2.1e-08 interpro_id=IPR022453 interpro_description=Zinc finger, YgiT-type)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLI9_ACCPU
|
|
AMDSBA3_55_10
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
7907..8347
|
Putative uncharacterized protein n=2 Tax=Bacillus sp. B14905 RepID=A3IE05_9BACI (db=UNIREF evalue=9.2e-16 bit_score=89.0 identity=42.1 coverage=68.70748299319727)
hypothetical protein (db=KEGG evalue=6.9e-11 bit_score=72.4 identity=49.3 coverage=46.93877551020408)
(db=HMMPfam db_id=PF02899 from=40 to=109 evalue=4.9e-07 interpro_id=IPR004107 interpro_description=Integrase, SAM-like, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
Uncharacterized protein {ECO:0000313|EMBL:EPZ41623.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestr
|
|
AMDSBA3_55_11
unknown
|
Not on your lists |
comp(8531..8659)
|
8531..8659 - ( gc_cont=0.535)
|
|
AMDSBA3_55_12
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(8667..9164)
|
GCN5 family acetyltransferase
Phosphinothricin N-acetyltransferase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJ26_9SPHI (db=UNIREF evalue=5.2e-15 bit_score=86.7 identity=34.2 coverage=92.7710843373494)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=164 evalue=6.0e-38 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
seg (db=Seg db_id=seg from=87 to=97)
|
|
AMDSBA3_55_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9501..10406
|
hypothetical protein
hypothetical protein
Conserved hypothetical membrane protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA9_9EURY (db=UNIREF evalue=1.9e-23 bit_score=115.5 identity=50.0 coverage=37.74834437086093)
seg (db=Seg db_id=seg from=140 to=154)
|
|
AMDSBA3_55_14
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(10516..12441)
|
ABC transporter-like protein
ABC transporter-like protein
ABC transporter ATP-binding/permease protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=D3E4T4_METRM (db=UNIREF evalue=7.6e-155 bit_score=553.1 identity=45.2 coverage=91.43302180685359)
transmembrane_regions (db=TMHMM db_id=tmhmm from=192 to=211)
|
|
AMDSBA3_55_15
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria
|
Not on your lists |
comp(12438..14165)
|
ABC transporter-like protein
seg (db=Seg db_id=seg from=355 to=371)
seg (db=Seg db_id=seg from=280 to=296)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=297)
|
|
AMDSBA3_55_16
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14507..15184
|
ArsR family transcriptional regulator
Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U8B7_PHYPA (db=UNIREF evalue=7.5e-17 bit_score=93.2 identity=36.7 coverage=47.78761061946903)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=115 to=219 evalue=1.2e-30 interpro_id=IPR001763 interpro_description=Rhodanese-like)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=7 to=101 evalue=2.7e-21)
|
|
AMDSBA3_55_17
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15181..16356
|
Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase (EC:2.8.1.7)
Aminotransferase, class V n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZR4_9BACT (db=UNIREF evalue=2.8e-75 bit_score=288.1 identity=44.9 coverage=94.38775510204081)
seg (db=Seg db_id=seg from=370 to=384)
|
|
AMDSBA3_55_18
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria
|
Not on your lists |
16363..16713
|
ychN_[H]; DsrE family protein
Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVY1_9VIBR (db=UNIREF evalue=1.9e-16 bit_score=90.9 identity=39.8 coverage=98.29059829059828)
no description (db=Gene3D db_id=G3DSA:3.40.1260.10 from=3 to=116 evalue=4.9e-30)
DsrEFH-like (db=superfamily db_id=SSF75169 from=1 to=116 evalue=1.5e-29)
|
|
AMDSBA3_55_19
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16754..17905
|
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Dehydrogenase/reductase n=45 Tax=Mycobacterium tuberculosis complex RepID=G2UQK8_MYCTU (db=UNIREF evalue=1.6e-72 bit_score=278.9 identity=43.8 coverage=98.4375)
seg (db=Seg db_id=seg from=184 to=197)
|
|
AMDSBA3_55_20
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria
|
Not on your lists |
18301..18849
|
OsmC family protein
OsmC family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDV7_9EURY (db=UNIREF evalue=4.5e-36 bit_score=156.8 identity=46.8 coverage=92.89617486338798)
OsmC-like (db=superfamily db_id=SSF82784 from=25 to=180 evalue=1.1e-21 interpro_id=IPR003718 interpro_description=Peroxiredoxin, OsmC-like protein GO=Biological Process: response to stress (GO:0006950))
(db=HMMPfam db_id=PF02566 from=74 to=178 evalue=2.7e-18 interpro_id=IPR003718 interpro_description=Peroxiredoxin, OsmC-like protein GO=Biological Process: response to stress (GO:0006950))
|
|
AMDSBA3_55_21
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
18970..20145
|
methionine gamma-lyase (EC:4.4.1.11)
Cystathionine gamma-synthase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIW0_9EURY (db=UNIREF evalue=4.4e-81 bit_score=307.4 identity=42.5 coverage=94.13265306122449)
seg (db=Seg db_id=seg from=133 to=144)
seg (db=Seg db_id=seg from=162 to=180)
|
|
AMDSBA3_55_22
unknown
|
Not on your lists |
comp(20686..20871)
|
20686..20871 - ( gc_cont=0.548)
|
|
AMDSBA3_55_23
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(21298..22059)
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HU09_9BACT (db=UNIREF evalue=7.4e-45 bit_score=186.4 identity=38.8 coverage=95.66929133858267)
(db=HMMPfam db_id=PF11251 from=11 to=242 evalue=4.0e-89 interpro_id=IPR024423 interpro_description=Protein of unknown function DUF3050)
Heme oxygenase-like (db=superfamily db_id=SSF48613 from=124 to=242 evalue=1.6e-06 interpro_id=IPR016084 interpro_description=Haem oxygenase-like, multi-helical)
|
|
AMDSBA3_55_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22314..22973)
|
group 1 glycosyl transferase
Glycosyl transferase group 1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TVP0_9FIRM (db=UNIREF evalue=5.4e-44 bit_score=183.3 identity=44.0 coverage=98.18181818181819)
seg (db=Seg db_id=seg from=106 to=120)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=9 to=217 evalue=1.4e-13)
|
|
AMDSBA3_55_25
unknown
|
Not on your lists |
comp(22996..23199)
|
seg (db=Seg db_id=seg from=46 to=67)
|
|
AMDSBA3_55_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23196..24179)
|
hypothetical protein
DMSO reductase anchor subunit (DmsC) n=1 Tax=Thiocapsa marina 5811 RepID=F9U5X8_9GAMM (db=UNIREF evalue=1.7e-17 bit_score=95.9 identity=27.1 coverage=93.29268292682927)
seg (db=Seg db_id=seg from=149 to=167)
seg (db=Seg db_id=seg from=82 to=100)
|
|
AMDSBA3_55_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(24176..24841)
|
4Fe-4S ferredoxin
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVN8_9FIRM (db=UNIREF evalue=3.6e-112 bit_score=409.8 identity=83.2 coverage=98.64864864864865)
|
|
AMDSBA3_55_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(24846..27701)
|
molybdopterin oxidoreductase
rbh
molybdopterin oxidoreductase
rbh
Oxidoreductase, molybdopterin-binding n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SR27_9RHOB (db=UNIREF evalue=7.8e-233 bit_score=812.8 identity=44.5 coverage=98.00420168067227)
seg (db=Seg db_id=seg from=930 to=936)
|
|
AMDSBA3_55_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
27814..28728
|
LysR family transcriptional regulator
rbh
(db=HMMPfam db_id=PF03466 from=90 to=289 evalue=1.2e-34 interpro_id=IPR005119 interpro_description=LysR, substrate-binding)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=82 to=294 evalue=7.8e-32)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=111 evalue=7.1e-26)
|
|
AMDSBA3_55_30
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
28845..29231
|
hypothetical protein
Transcriptional regulator, MarR family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM89_9FIRM (db=UNIREF evalue=1.7e-18 bit_score=97.8 identity=43.2 coverage=86.82170542635659)
(db=HMMPfam db_id=PF04343 from=7 to=113 evalue=1.2e-23 interpro_id=IPR007438 interpro_description=Protein of unknown function DUF488)
Uncharacterized protein {ECO:0000313|EMBL:KJS59862.1}; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
|