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AMDSBA5_35

Alias: AMDSBA5_C34

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_35_1
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27..2159)
DNA (2133bp) protein (711aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein
peptidase S9B dipeptidylpeptidase IV domain-containing protein
Peptidase S9B, dipeptidylpeptidase IV domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBC3_9DELT (db=UNIREF evalue=2.5e-119 bit_score=435.3 identity=36.9 coverage=96.90576652601969)
AMDSBA5_35_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2545..3117
DNA (573bp) protein (191aa)
Abortive infection protein
Abortive infection protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUU9_9FIRM (db=UNIREF evalue=1.5e-37 bit_score=161.8 identity=48.8 coverage=87.95811518324608)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=189)
AMDSBA5_35_3
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3111..3563)
DNA (453bp) protein (151aa)
ADP-ribose pyrophosphatase n=1 Tax=Planococcus donghaensis MPA1U2 RepID=E7RFS5_9BACL (db=UNIREF evalue=3.0e-22 bit_score=110.5 identity=45.3 coverage=87.41721854304636)
seg (db=Seg db_id=seg from=45 to=58)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=39 to=60 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=1 to=108 evalue=3.7e-28 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA5_35_4
Paenibacillus sp. FSL R5-0345, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3684..4208)
DNA (525bp) protein (175aa)
GCN5 family acetyltransferase
GCN5-related N-acetyltransferase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SU17_METLZ (db=UNIREF evalue=2.6e-17 bit_score=94.4 identity=34.5 coverage=89.14285714285714)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=11 to=174 evalue=9.8e-40 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=12 to=172 evalue=5.2e-45 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA5_35_5
unknown

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4307..4600
DNA (294bp) protein (98aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg (db=Seg db_id=seg from=30 to=40)
(db=HMMPfam db_id=PF09851 from=14 to=88 evalue=3.2e-10 interpro_id=IPR018649 interpro_description=Protein of unknown function DUF2078, membrane)
AMDSBA5_35_6
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4983..5546)
DNA (564bp) protein (188aa)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=1 to=172 evalue=3.7e-21)
no description (db=Gene3D db_id=G3DSA:3.40.50.1240 from=1 to=169 evalue=1.4e-14)
(db=HMMPfam db_id=PF00300 from=4 to=138 evalue=3.7e-08 interpro_id=IPR013078 interpro_description=Histidine phosphatase superfamily, clade-1)
PHOSPHOGLYCERATE MUTASE (db=HMMPanther db_id=PTHR23029 from=3 to=172 evalue=1.3e-06)
AMDSBA5_35_7
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(5701..6060)
DNA (360bp) protein (120aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UU57_9MICO (db=UNIREF evalue=1.1e-14 bit_score=85.1 identity=36.8 coverage=94.16666666666667)
NTF2-like (db=superfamily db_id=SSF54427 from=1 to=115 evalue=2.2e-23)
(db=HMMPfam db_id=PF07366 from=9 to=117 evalue=2.8e-11 interpro_id=IPR009959 interpro_description=Polyketide cyclase, SnoaL-like)
AMDSBA5_35_8
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6353..6784
DNA (432bp) protein (144aa)
glutaredoxin-like domain protein
Protein disulfide oxidoreductase n=4 Tax=Thermococcus RepID=B6YTB7_THEON (db=UNIREF evalue=3.7e-09 bit_score=67.0 identity=34.6 coverage=90.27777777777779)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=3 to=117 evalue=3.4e-18 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=1 to=115 evalue=3.2e-11 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
AMDSBA5_35_9
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

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7430..8461
DNA (1032bp) protein (344aa)
7430..8461 + ( gc_cont=0.505)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJR98375.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
AMDSBA5_35_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8564..10174)
DNA (1611bp) protein (537aa)
amino acid permease
Amino acid transporter n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C7I2_9CREN (db=UNIREF evalue=1.1e-101 bit_score=376.3 identity=39.5 coverage=97.39292364990689)
transmembrane_regions (db=TMHMM db_id=tmhmm from=457 to=479)
transmembrane_regions (db=TMHMM db_id=tmhmm from=489 to=511)
AMDSBA5_35_11
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10522..11361
DNA (840bp) protein (280aa)
putative dioxygenase
Putative dioxygenase n=1 Tax=Thermococcus sp. CL1 RepID=I3ZUW6_9EURY (db=UNIREF evalue=1.6e-24 bit_score=119.0 identity=28.6 coverage=91.42857142857143)
(db=HMMPfam db_id=PF02900 from=7 to=262 evalue=1.3e-20 interpro_id=IPR004183 interpro_description=Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO=Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: ferrous iron binding (GO:0008198), Molecular Function: oxidoreductase activity (GO:0016491))
LigB subunit of an aromatic-ring-opening dioxygenase LigAB (db=superfamily db_id=SSF53213 from=1 to=275 evalue=1.1e-13 interpro_id=IPR004183 interpro_description=Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO=Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: ferrous iron binding (GO:0008198), Molecular Function: oxidoreductase activity (GO:0016491))
AMDSBA5_35_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11456..12064
DNA (609bp) protein (203aa)
pncA; nicotinamidase
Nicotinamidase n=2 Tax=Thermococcus RepID=G2M2E1_9EURY (db=UNIREF evalue=8.8e-41 bit_score=172.6 identity=45.1 coverage=87.68472906403942)
Isochorismatase-like hydrolases (db=superfamily db_id=SSF52499 from=5 to=197 evalue=9.3e-49 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.40.50.850 from=4 to=197 evalue=5.6e-48 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA5_35_13
Mycobacterium immunogenum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12009..12629
DNA (621bp) protein (207aa)
seg (db=Seg db_id=seg from=97 to=108)
no description (db=Gene3D db_id=G3DSA:3.40.50.850 from=19 to=202 evalue=2.5e-41 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Isochorismatase-like hydrolases (db=superfamily db_id=SSF52499 from=17 to=202 evalue=8.3e-41 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
(db=HMMPfam db_id=PF00857 from=22 to=196 evalue=8.8e-36 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBA5_35_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12643..13965
DNA (1323bp) protein (441aa)
putative signal transduction histidine kinase
putative signal transduction histidine kinase
Two-component sensor histidine kinase n=2 Tax=Sulfobacillus acidophilus RepID=F8I4M2_SULAT (db=UNIREF evalue=3.0e-142 bit_score=510.8 identity=61.3 coverage=95.46485260770974)
seg (db=Seg db_id=seg from=6 to=28)
AMDSBA5_35_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13993..14724
DNA (732bp) protein (244aa)
LytTR family two component transcriptional regulator
Putative response regulator in two-component regulatory system n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFX0_9SPHN (db=UNIREF evalue=7.1e-21 bit_score=106.7 identity=28.5 coverage=97.1311475409836)
TWO-COMPONENT SENSOR PROTEIN HISTIDINE PROTEIN KINASE (DHKK, DHKJ) (db=HMMPanther db_id=PTHR23283:SF49 from=2 to=123 evalue=3.5e-09)
seg (db=Seg db_id=seg from=224 to=237)
AMDSBA5_35_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14717..15154)
DNA (438bp) protein (146aa)
moaE; Molybdopterin synthase catalytic subunit
Molybdopterin synthase catalytic subunit n=1 Tax=Bacillus halodurans C-125 RepID=MOAE_BACHD (db=UNIREF evalue=6.3e-25 bit_score=119.4 identity=39.4 coverage=96.57534246575342)
seg (db=Seg db_id=seg from=85 to=99)
Molybdopterin synthase subunit MoaE (db=superfamily db_id=SSF54690 from=3 to=137 evalue=2.1e-46 interpro_id=IPR003448 interpro_description=Molybdopterin biosynthesis MoaE GO=Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777))
AMDSBA5_35_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15187..15432)
DNA (246bp) protein (82aa)
MoaD/ThiS (db=superfamily db_id=SSF54285 from=4 to=81 evalue=1.6e-14 interpro_id=IPR016155 interpro_description=Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp)
(db=HMMPfam db_id=PF02597 from=11 to=81 evalue=2.6e-10 interpro_id=IPR003749 interpro_description=ThiamineS)
no description (db=Gene3D db_id=G3DSA:3.10.20.30 from=4 to=81 evalue=3.7e-09 interpro_id=IPR012675 interpro_description=Beta-grasp fold, ferredoxin-type)
molybdopterin synthase subunit MoaD
AMDSBA5_35_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15487..16311
DNA (825bp) protein (275aa)
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8U0J1_9FIRM (db=UNIREF evalue=1.0e-47 bit_score=196.1 identity=52.5 coverage=63.272727272727266)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=123 to=258 evalue=3.0e-30)
AMDSBA5_35_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16253..17077)
DNA (825bp) protein (275aa)
prolipoprotein diacylglyceryl transferase rbh
Prolipoprotein diacylglyceryl transferase n=5 Tax=Streptococcus equi RepID=LGT_STRE4 (db=UNIREF evalue=3.7e-10 bit_score=71.2 identity=26.7 coverage=66.54545454545455)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
AMDSBA5_35_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17101..18369)
DNA (1269bp) protein (423aa)
Glutamate-1-semialdehyde 2,1-aminomutase 2 n=216 Tax=Bacteria RepID=GSA2_STAA3 (db=UNIREF evalue=5.6e-114 bit_score=416.8 identity=47.9 coverage=99.29078014184397)
AA_TRANSFER_CLASS_3 (db=PatternScan db_id=PS00600 from=231 to=267 evalue=0.0 interpro_id=IPR005814 interpro_description=Aminotransferase class-III GO=Molecular Function: transaminase activity (GO:0008483), Molecular Function: pyridoxal phosphate binding (GO:0030170))
hemL: glutamate-1-semialdehyde-2,1-aminomuta (db=HMMTigr db_id=TIGR00713 from=1 to=422 evalue=2.5e-247 interpro_id=IPR004639 interpro_description=Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO=Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: glutamate-1-semialdehyde 2,1-aminomutase activity (GO:0042286))
GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE (db=HMMPanther db_id=PTHR11986:SF5 from=18 to=422 evalue=6.6e-203 interpro_id=IPR004639 interpro_description=Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO=Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: glutamate-1-semialdehyde 2,1-aminomutase activity (GO:0042286))
AMDSBA5_35_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18388..19455)
DNA (1068bp) protein (356aa)
GTP-dependent nucleic acid-binding protein EngD
Putative GTP-binding protein n=1 Tax=Leptospirillum ferrooxidans C2-3 RepID=I0IMR1_LEPFC (db=UNIREF evalue=2.5e-67 bit_score=261.5 identity=41.2 coverage=98.59550561797754)
seg (db=Seg db_id=seg from=228 to=242)
seg (db=Seg db_id=seg from=118 to=132)
AMDSBA5_35_22
unknown

Not on your lists

comp(19563..19721)
DNA (159bp) protein (53aa)
19563..19721 - ( gc_cont=0.459)
AMDSBA5_35_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19833..20282)
DNA (450bp) protein (150aa)
OsmC family protein
OsmC family protein n=3 Tax=Geobacillus RepID=F8D2C0_BACTR (db=UNIREF evalue=1.7e-28 bit_score=131.3 identity=51.1 coverage=86.0)
OsmC-like (db=superfamily db_id=SSF82784 from=1 to=140 evalue=1.0e-37 interpro_id=IPR003718 interpro_description=Peroxiredoxin, OsmC-like protein GO=Biological Process: response to stress (GO:0006950))
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=42 to=140 evalue=2.2e-29 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta)
AMDSBA5_35_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20294..21007)
DNA (714bp) protein (238aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0I5_9FIRM (db=UNIREF evalue=2.0e-52 bit_score=211.5 identity=46.2 coverage=96.21848739495799)
Uncharacterized protein {ECO:0000313|EMBL:AEJ39658.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4L0_SULAT
AMDSBA5_35_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21032..21745)
DNA (714bp) protein (238aa)
hypothetical protein
UPF0173 metal-dependent hydrolase TM_1162 n=5 Tax=Thermotoga RepID=Y1162_THEMA (db=UNIREF evalue=7.6e-44 bit_score=183.0 identity=42.8 coverage=92.85714285714286)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=10 to=227 evalue=5.8e-39)
no description (db=HMMSmart db_id=SM00849 from=14 to=202 evalue=2.7e-15 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA5_35_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21854..22516)
DNA (663bp) protein (221aa)
HAD-superfamily hydrolase (EC:3.6.1.1)
Phosphoglycolate phosphatase n=2 Tax=Erysipelothrix rhusiopathiae RepID=E7FWQ3_ERYRH (db=UNIREF evalue=1.7e-13 bit_score=82.0 identity=29.3 coverage=75.56561085972851)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=212 evalue=1.5e-53 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=2 to=212 evalue=3.7e-36 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA5_35_27

Not on your lists

comp(22529..23356)
DNA (828bp) protein (276aa)
oxidoreductase
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Magnaporthe oryzae 70-15 RepID=G4MUU0_MAGO7 (db=UNIREF evalue=6.2e-21 bit_score=107.1 identity=34.0 coverage=65.94202898550725)
3-HYDROXYISOBUTYRATE DEHYDROGENASE (db=HMMPanther db_id=PTHR22981:SF7 from=1 to=275 evalue=2.0e-84)
3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR22981 from=1 to=275 evalue=2.0e-84 interpro_id=IPR015815 interpro_description=3-hydroxyacid dehydrogenase/reductase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_35_28
unknown

Not on your lists

23725..24141
DNA (417bp) protein (139aa)
seg (db=Seg db_id=seg from=82 to=94)
(db=HMMPfam db_id=PF05751 from=54 to=128 evalue=6.7e-05 interpro_id=IPR008620 interpro_description=FixH)
AMDSBA5_35_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24128..24715
DNA (588bp) protein (196aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTA0_9FIRM (db=UNIREF evalue=2.0e-37 bit_score=161.4 identity=44.8 coverage=86.73469387755102)
seg (db=Seg db_id=seg from=69 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=193)
AMDSBA5_35_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24786..25514
DNA (729bp) protein (243aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=G2TCS8_RHORU (db=UNIREF evalue=7.8e-20 bit_score=103.2 identity=34.0 coverage=91.76954732510289)
seg (db=Seg db_id=seg from=160 to=176)
seg (db=Seg db_id=seg from=84 to=104)
Displaying items 1-30 of 41 in total

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