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AMDSBA5_36

Alias: AMDSBA5_C35

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_36_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111..1523
DNA (1413bp) protein (471aa)
hypothetical protein rbh
hypothetical protein rbh
Peptidase M20 n=1 Tax=Meiothermus ruber DSM 1279 RepID=D3PQI2_MEIRD (db=UNIREF evalue=8.7e-108 bit_score=396.4 identity=45.9 coverage=93.41825902335457)
AMDSBA5_36_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1510..2259
DNA (750bp) protein (250aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Burkholderia sp. H160 RepID=B5WQ07_9BURK (db=UNIREF evalue=4.4e-34 bit_score=150.6 identity=41.2 coverage=93.2)
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=105 to=220 evalue=9.0e-20 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=184 to=238 evalue=3.1e-06)
AMDSBA5_36_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2411..2839
DNA (429bp) protein (143aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTW8_9FIRM (db=UNIREF evalue=2.8e-41 bit_score=173.7 identity=56.0 coverage=97.9020979020979)
Uncharacterized protein {ECO:0000313|EMBL:AEJ40984.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I5D7_SULAT
AMDSBA5_36_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2836..3801
DNA (966bp) protein (322aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8PIK6_POSPM (db=UNIREF evalue=3.9e-51 bit_score=207.6 identity=39.5 coverage=93.7888198757764)
seg (db=Seg db_id=seg from=245 to=261)
seg (db=Seg db_id=seg from=171 to=187)
AMDSBA5_36_5
unknown

Not on your lists

4114..4293
DNA (180bp) protein (60aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
AMDSBA5_36_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4379..5479
DNA (1101bp) protein (367aa)
C4-dicarboxylate transporter/malic acid transport protein
Sulfite efflux pump SSU1 n=13 Tax=Arthrodermataceae RepID=SSU1_TRIRU (db=UNIREF evalue=1.3e-45 bit_score=189.5 identity=33.6 coverage=91.28065395095368)
seg (db=Seg db_id=seg from=339 to=364)
seg (db=Seg db_id=seg from=267 to=278)
AMDSBA5_36_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5560..6480
DNA (921bp) protein (307aa)
family 2 glycosyl transferase
seg (db=Seg db_id=seg from=192 to=200)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=11 to=224 evalue=5.8e-34)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=14 to=257 evalue=4.2e-31)
AMDSBA5_36_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6508..7431
DNA (924bp) protein (308aa)
LysR family transcriptional regulator
HTH-type transcriptional regulator CynR n=254 Tax=Enterobacteriaceae RepID=CYNR_ECO57 (db=UNIREF evalue=1.8e-21 bit_score=109.0 identity=29.6 coverage=87.98701298701299)
(db=HMMPfam db_id=PF03466 from=87 to=291 evalue=6.1e-46 interpro_id=IPR005119 interpro_description=LysR, substrate-binding)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=84 to=301 evalue=3.6e-42)
AMDSBA5_36_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7481..9571)
DNA (2091bp) protein (697aa)
NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Sulfobacillus acidophilus RepID=G8TUC1_9FIRM (db=UNIREF evalue=1.1e-178 bit_score=632.5 identity=48.6 coverage=94.97847919655668)
NADH/ubiquinone/plastoquinone
NADH/ubiquinone/plastoquinone
transmembrane_regions (db=TMHMM db_id=tmhmm from=554 to=576)
AMDSBA5_36_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9549..10121)
DNA (573bp) protein (191aa)
NADH ubiquinone oxidoreductase 20 kDa subunit
Subunit of putative formate hydrogenlyase-like membrane complex n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P2H1_AROAE (db=UNIREF evalue=5.9e-31 bit_score=139.8 identity=42.9 coverage=85.34031413612566)
HydA/Nqo6-like (db=superfamily db_id=SSF56770 from=48 to=173 evalue=5.0e-38)
FORMATE HYDROGENLYASE 7 (db=HMMPanther db_id=PTHR11995:SF3 from=46 to=173 evalue=9.9e-38)
AMDSBA5_36_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10135..11514)
DNA (1380bp) protein (460aa)
hypothetical protein
Ni,Fe-hydrogenase III large subunit n=1 Tax=Acidithiobacillus thiooxidans ATCC 19377 RepID=UPI0002624DDF (db=UNIREF evalue=3.7e-47 bit_score=194.9 identity=33.2 coverage=80.65217391304348)
HydB/Nqo4-like (db=superfamily db_id=SSF56762 from=114 to=459 evalue=4.2e-57)
NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT (db=HMMPanther db_id=PTHR11993 from=2 to=459 evalue=5.0e-37)
AMDSBA5_36_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11546..13003)
DNA (1458bp) protein (486aa)
hyfF; hydrogenase 4 subunit F
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YAN5_9DELT (db=UNIREF evalue=2.1e-56 bit_score=225.7 identity=33.4 coverage=90.12345679012346)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
AMDSBA5_36_13
unknown

Not on your lists

comp(13000..13638)
DNA (639bp) protein (213aa)
seg (db=Seg db_id=seg from=57 to=75)
seg (db=Seg db_id=seg from=36 to=52)
transmembrane_regions (db=TMHMM db_id=tmhmm from=175 to=197)
transmembrane_regions (db=TMHMM db_id=tmhmm from=149 to=171)
AMDSBA5_36_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13660..14610)
DNA (951bp) protein (317aa)
respiratory-chain NADH dehydrogenase subunit 1
NADH dehydrogenase superfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IBW7_ACIB4 (db=UNIREF evalue=5.8e-15 bit_score=87.4 identity=26.9 coverage=94.95268138801262)
seg (db=Seg db_id=seg from=251 to=264)
seg (db=Seg db_id=seg from=98 to=120)
AMDSBA5_36_15
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14765..15142)
DNA (378bp) protein (126aa)
protein of unknown function DUF190
Putative uncharacterized protein n=2 Tax=Amycolatopsis mediterranei RepID=G0G9G2_AMYMD (db=UNIREF evalue=9.3e-25 bit_score=118.6 identity=48.1 coverage=83.33333333333334)
GlnB-like (db=superfamily db_id=SSF54913 from=7 to=108 evalue=1.6e-34 interpro_id=IPR011322 interpro_description=Nitrogen regulatory PII-like, alpha/beta)
no description (db=Gene3D db_id=G3DSA:3.30.70.120 from=8 to=110 evalue=1.8e-32 interpro_id=IPR015867 interpro_description=Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal)
AMDSBA5_36_16
unknown

Not on your lists

comp(15271..15471)
DNA (201bp) protein (67aa)
15271..15471 - ( gc_cont=0.463)
AMDSBA5_36_17
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15468..15893)
DNA (426bp) protein (142aa)
GNAT family acetyltransferase
Acetyltransferase, GNAT family n=27 Tax=Bacillus cereus group RepID=B3YNP9_BACCE (db=UNIREF evalue=8.6e-19 bit_score=99.0 identity=46.5 coverage=84.50704225352112)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=28 to=141 evalue=5.4e-13 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF00583 from=55 to=120 evalue=3.7e-05 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
AMDSBA5_36_18
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16021..16473
DNA (453bp) protein (151aa)
16021..16473 + ( gc_cont=0.521)
Uncharacterized protein {ECO:0000313|EMBL:CDA47771.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialist
AMDSBA5_36_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16388..16831)
DNA (444bp) protein (148aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=2 Tax=Sulfobacillus acidophilus RepID=G8TTV5_9FIRM (db=UNIREF evalue=7.3e-61 bit_score=238.8 identity=75.2 coverage=94.5945945945946)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=141 evalue=1.6e-45 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=2 to=140 evalue=9.2e-43)
AMDSBA5_36_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16831..17640)
DNA (810bp) protein (270aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WHC7_BACSK (db=UNIREF evalue=2.3e-20 bit_score=105.1 identity=45.5 coverage=43.333333333333336)
NIF3 (NGG1p interacting factor 3)-like (db=superfamily db_id=SSF102705 from=83 to=191 evalue=2.7e-26 interpro_id=IPR002678 interpro_description=NGG1p interacting factor 3, NIF3)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I5F4_SULAT
AMDSBA5_36_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17637..18299)
DNA (663bp) protein (221aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I5F5_SULAT (db=UNIREF evalue=7.4e-25 bit_score=119.8 identity=37.4 coverage=91.8552036199095)
seg (db=Seg db_id=seg from=25 to=36)
(db=HMMPfam db_id=PF04816 from=63 to=165 evalue=2.6e-17 interpro_id=IPR006901 interpro_description=Protein of unknown function DUF633 GO=Molecular Function: tRNA (adenine-N1-)-methyltransferase activity (GO:0016429))
AMDSBA5_36_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18253..18849)
DNA (597bp) protein (199aa)
tdk; thymidine kinase
Thymidine kinase n=2 Tax=Giardia intestinalis RepID=A8BRU1_GIAIC (db=UNIREF evalue=1.6e-07 bit_score=62.0 identity=25.7 coverage=85.42713567839196)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=132 to=191 evalue=6.3e-07)
Thymidine kinase (db=HMMPIR db_id=PIRSF035805 from=1 to=183 evalue=9.7e-37 interpro_id=IPR001267 interpro_description=Thymidine kinase GO=Molecular Function: thymidine kinase activity (GO:0004797), Molecular Function: ATP binding (GO:0005524))
AMDSBA5_36_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19571..20836)
DNA (1266bp) protein (422aa)
sulfide-quinone reductase
sulfide-quinone reductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=12 Tax=Sulfolobus RepID=C3MJE8_SULIL (db=UNIREF evalue=4.8e-49 bit_score=201.1 identity=32.5 coverage=95.73459715639811)
no description (db=Gene3D db_id=G3DSA:3.50.50.60 from=2 to=342 evalue=6.9e-26)
AMDSBA5_36_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21001..21759)
DNA (759bp) protein (253aa)
pleD; diguanylate cyclase
Sensory box/GGDEF family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ68_9FIRM (db=UNIREF evalue=4.8e-12 bit_score=77.4 identity=31.4 coverage=65.21739130434783)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
GGDEF: diguanylate cyclase (GGDEF) domain (db=HMMTigr db_id=TIGR00254 from=86 to=251 evalue=6.5e-33 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
AMDSBA5_36_25
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(22181..22978)
DNA (798bp) protein (266aa)
metal-dependent hydrolase
Predicted protein n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CU43_ASPTN (db=UNIREF evalue=1.3e-07 bit_score=62.8 identity=28.0 coverage=75.18796992481202)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=5 to=242 evalue=3.6e-26)
(db=HMMPfam db_id=PF00753 from=24 to=169 evalue=6.2e-06 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA5_36_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23127..23948)
DNA (822bp) protein (274aa)
carbohydrate ABC transporter membrane protein 2
carbohydrate ABC transporter membrane protein 2
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=2 Tax=Sulfobacillus acidophilus RepID=G8TSK5_9FIRM (db=UNIREF evalue=2.7e-125 bit_score=453.8 identity=81.5 coverage=98.54014598540147)
seg (db=Seg db_id=seg from=4 to=15)
AMDSBA5_36_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23949..24929)
DNA (981bp) protein (327aa)
carbohydrate ABC transporter membrane protein 1
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JJP6_DESDE (db=UNIREF evalue=1.9e-29 bit_score=135.6 identity=48.2 coverage=41.896024464831804)
transmembrane_regions (db=TMHMM db_id=tmhmm from=248 to=270)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=199)
AMDSBA5_36_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24993..26300)
DNA (1308bp) protein (436aa)
carbohydrate ABC transporter substrate-binding protein rbh
carbohydrate ABC transporter substrate-binding protein rbh
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=2 Tax=Sulfobacillus acidophilus RepID=G8TSK3_9FIRM (db=UNIREF evalue=1.7e-190 bit_score=671.0 identity=75.1 coverage=98.85321100917432)
seg (db=Seg db_id=seg from=417 to=432)
Displaying 28 items

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