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AMDSBA5_41

Alias: AMDSBA5_C40

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_41_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..251
DNA (249bp) protein (83aa)
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein n=5 Tax=Sulfobacillus acidophilus RepID=G8TUF1_9FIRM (db=UNIREF evalue=2.6e-31 bit_score=139.8 identity=95.9 coverage=86.74698795180723)
coiled-coil (db=Coil db_id=coil from=46 to=81 evalue=NA)
(db=HMMPfam db_id=PF01527 from=1 to=68 evalue=1.1e-08 interpro_id=IPR002514 interpro_description=Transposase IS3/IS911family GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBA5_41_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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589..1101
DNA (513bp) protein (171aa)
transposase IS3/IS911 family protein
ISSd1, transposase OrfB n=2 Tax=Shigella dysenteriae RepID=B3X7H4_SHIDY (db=UNIREF evalue=6.3e-16 bit_score=89.7 identity=54.9 coverage=40.93567251461988)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=2 to=170 evalue=4.6e-42 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
(db=HMMPfam db_id=PF00665 from=7 to=123 evalue=2.6e-28 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Biological Process: DNA integration (GO:0015074))
AMDSBA5_41_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(1291..4701)
DNA (3411bp) protein (1137aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDD8_9SPHN (db=UNIREF evalue=3.7e-189 bit_score=667.9 identity=37.4 coverage=97.80123131046614)
seg (db=Seg db_id=seg from=858 to=874)
AMDSBA5_41_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4970..5596)
DNA (627bp) protein (209aa)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=132 evalue=4.7e-29 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=2 to=128 evalue=1.2e-25)
no description (db=HMMSmart db_id=SM00448 from=2 to=115 evalue=2.9e-24 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF00072 from=4 to=115 evalue=7.5e-23 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA5_41_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5584..6762)
DNA (1179bp) protein (393aa)
putative signal transduction histidine kinase
GAF sensor signal transduction histidine kinase n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=D5UGT2_CELFN (db=UNIREF evalue=1.6e-09 bit_score=69.7 identity=26.6 coverage=56.74300254452926)
GAF domain-like (db=superfamily db_id=SSF55781 from=17 to=199 evalue=1.9e-27)
no description (db=Gene3D db_id=G3DSA:3.30.450.40 from=24 to=180 evalue=3.5e-19)
AMDSBA5_41_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7015..7902
DNA (888bp) protein (296aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CT03_9BURK (db=UNIREF evalue=1.2e-30 bit_score=139.4 identity=35.6 coverage=87.16216216216216)
seg (db=Seg db_id=seg from=114 to=132)
FAD-binding domain (db=superfamily db_id=SSF56176 from=3 to=175 evalue=6.7e-56 interpro_id=IPR016166 interpro_description=FAD-binding, type 2 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_41_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7940..8446
DNA (507bp) protein (169aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2)
(2Fe-2S)-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ74_9CHLR (db=UNIREF evalue=3.1e-47 bit_score=193.7 identity=58.3 coverage=88.75739644970415)
XANTHINE DEHYDROGENASE (db=HMMPanther db_id=PTHR11908 from=10 to=157 evalue=6.3e-53)
CO dehydrogenase ISP C-domain like (db=superfamily db_id=SSF47741 from=82 to=164 evalue=2.5e-36 interpro_id=IPR002888 interpro_description=[2Fe-2S]-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_41_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8443..10797
DNA (2355bp) protein (785aa)
carbon monoxide dehydrogenase, large subunit (EC:1.2.99.2) rbh
carbon monoxide dehydrogenase, large subunit (EC:1.2.99.2) rbh
Carbon monoxide dehydrogenase, large subunit apoprotein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYR9_9FIRM (db=UNIREF evalue=0.0 bit_score=1415.6 identity=86.3 coverage=99.61783439490446)
AMDSBA5_41_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10817..11782
DNA (966bp) protein (322aa)
YHS domain-containing protein rbh
YHS domain-containing protein rbh
YHS domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYS0_9FIRM (db=UNIREF evalue=3.0e-104 bit_score=384.0 identity=60.5 coverage=97.20496894409938)
AMDSBA5_41_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11787..12239
DNA (453bp) protein (151aa)
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G n=2 Tax=Sulfobacillus acidophilus RepID=F8IAR0_SULAT (db=UNIREF evalue=1.6e-50 bit_score=204.5 identity=67.6 coverage=96.68874172185431)
(db=HMMPfam db_id=PF06240 from=11 to=144 evalue=1.1e-24 interpro_id=IPR010419 interpro_description=Carbon monoxide dehydrogenase subunit G)
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=146 evalue=1.9e-16)
AMDSBA5_41_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12260..13111
DNA (852bp) protein (284aa)
ATPase
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9X1_9GAMM (db=UNIREF evalue=4.1e-60 bit_score=237.3 identity=43.9 coverage=94.01408450704226)
seg (db=Seg db_id=seg from=133 to=145)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=31 to=245 evalue=9.8e-39)
AMDSBA5_41_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13099..14208
DNA (1110bp) protein (370aa)
VWA containing CoxE family protein
VWA containing CoxE family protein
VWA containing CoxE family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYS3_9FIRM (db=UNIREF evalue=1.2e-96 bit_score=359.0 identity=49.6 coverage=98.64864864864865)
AMDSBA5_41_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14227..15249
DNA (1023bp) protein (341aa)
xdhC; xanthine dehydrogenase rbh
xdhC; xanthine dehydrogenase rbh
Xanthine dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TTK6_9FIRM (db=UNIREF evalue=1.6e-111 bit_score=408.3 identity=55.9 coverage=98.82697947214076)
AMDSBA5_41_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15224..15853
DNA (630bp) protein (210aa)
molybdenum cofactor cytidylyltransferase
seg (db=Seg db_id=seg from=143 to=153)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=9 to=201 evalue=1.0e-19)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=198 evalue=1.1e-18)
AMDSBA5_41_15
unknown

Not on your lists

comp(15984..16340)
DNA (357bp) protein (119aa)
seg (db=Seg db_id=seg from=16 to=51)
AMDSBA5_41_16
GWA1_OP11_Woesebacteria_41_8_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16369..16911
DNA (543bp) protein (181aa)
seg (db=Seg db_id=seg from=168 to=179)
hypothetical protein Tax=GWA1_OP11_Woesebacteria_41_8_curated
AMDSBA5_41_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17092..18327
DNA (1236bp) protein (412aa)
major facilitator superfamily protein
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TVB6_9FIRM (db=UNIREF evalue=7.9e-97 bit_score=359.8 identity=45.1 coverage=94.1747572815534)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA5_41_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18322..19056)
DNA (735bp) protein (245aa)
integrase catalytic subunit
Integrase, catalytic region n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMN2_9FIRM (db=UNIREF evalue=2.1e-17 bit_score=95.1 identity=46.6 coverage=52.244897959183675)
seg (db=Seg db_id=seg from=41 to=55)
seg (db=Seg db_id=seg from=68 to=76)
AMDSBA5_41_19
unknown

Not on your lists

comp(19168..19269)
DNA (102bp) protein (34aa)
19168..19269 - ( gc_cont=0.598)
AMDSBA5_41_20
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19639..22533
DNA (2895bp) protein (965aa)
mod_[H]; putative DNA methylase
mod_[H]; putative DNA methylase
Putative type III restriction-modification system, methylation subunit n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AN43_9BACT (db=UNIREF evalue=3.3e-186 bit_score=657.9 identity=61.0 coverage=55.44041450777202)
AMDSBA5_41_21
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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22534..25341
DNA (2808bp) protein (936aa)
hypothetical protein
hypothetical protein
Putative type III restriction-modification system, Res subunit n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AN44_9BACT (db=UNIREF evalue=0.0 bit_score=1262.7 identity=65.4 coverage=98.82478632478633)
AMDSBA5_41_22
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

25864..26286
DNA (423bp) protein (141aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=68)
seg (db=Seg db_id=seg from=74 to=119)
Displaying 22 items

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