ggKbase home page

GWA2_Bacteroidetes_42_15_gwa2_scaffold_652

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_1
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..961)
DNA (960bp) protein (320aa)
SNF2-like protein Tax=GWE2_Bacteroidetes_42_39_curated
SNF2-like protein id=1982225 bin=GWE2_Bacteroidetes_42_39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
helicase SNF2
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1289..2557)
DNA (1269bp) protein (423aa)
Major facilitator superfamily MFS_1 id=1982222 bin=GWE2_Bacteroidetes_42_39 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
major facilitator superfamily protein Tax=GWE2_Bacteroidetes_42_39_curated
major facilitator superfamily protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2583..4496)
DNA (1914bp) protein (638aa)
Uncharacterized protein Tax=GWE2_Bacteroidetes_42_39_curated
Uncharacterized protein id=1982219 bin=GWE2_Bacteroidetes_42_39 species=Alloprevotella rava genus=Alloprevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4527..5489)
DNA (963bp) protein (321aa)
Putative uncharacterized protein id=1982216 bin=GWE2_Bacteroidetes_42_39 species=Prevotella maculosa genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Tat pathway signal sequence domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
Tat pathway signal sequence domain-containing protein rbh
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5499..6554)
DNA (1056bp) protein (352aa)
Oxidoreductase domain protein id=1982214 bin=GWE2_Bacteroidetes_42_39 species=Caldivirga maquilingensis genus=Caldivirga taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
oxidoreductase domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
oxidoreductase domain-containing protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6572..7321)
DNA (750bp) protein (250aa)
id=1982190 Tax=GWE2_Bacteroidetes_42_39_curated
id=1982190 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7346..8101)
DNA (756bp) protein (252aa)
Phosphoheptose isomerase, putative id=1982188 bin=GWE2_Bacteroidetes_42_39 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
sugar isomerase Tax=GWE2_Bacteroidetes_42_39_curated
UPF0309 protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8120..9166)
DNA (1047bp) protein (349aa)
Conserved domain protein id=1982186 bin=GWE2_Bacteroidetes_42_39 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9168..10235)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein id=4857409 bin=GWA2_Bacteroidetes_42_15 species=Prevotella maculosa genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tat pathway signal sequence domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
Tat pathway signal sequence domain-containing protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10515..11939)
DNA (1425bp) protein (475aa)
RagB/SusD domain protein id=4857410 bin=GWA2_Bacteroidetes_42_15 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
RagB/SusD domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
RagB/SusD domain-containing protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11953..15264)
DNA (3312bp) protein (1104aa)
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_42_39_curated
TonB-dependent receptor plug id=1982180 bin=GWE2_Bacteroidetes_42_39 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
TonB-dependent receptor plug
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15441..16472)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein id=1982177 bin=GWE2_Bacteroidetes_42_39 species=Bacteroides sp. 2_1_33B genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
anti-sigma factor Tax=GWE2_Bacteroidetes_42_39_curated
iron dicitrate transport regulator FecR
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_13
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16719..17294)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor, expansion family 1 id=1982174 bin=GWE2_Bacteroidetes_42_39 species=Bacteroides finegoldii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWE2_Bacteroidetes_42_39_curated
RNA polymerase, sigma-24 subunit, ECF subfamily
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_trna_1
unknown

Not on your lists

17640..17712
DNA (73bp)
transferRNA
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18107..19702
DNA (1596bp) protein (532aa)
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=GWE2_Bacteroidetes_42_39_curat
two-component system sensor histidine kinase id=1982171 bin=GWE2_Bacteroidetes_42_39 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
histidine kinase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_15
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19704..20393
DNA (690bp) protein (230aa)
two component transcriptional regulator, winged helix family protein id=1982168 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
two component transcriptional regulator, winged helix family Tax=GWE2_Bacteroidetes_42_39_curated
transcriptional regulator
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20432..21574
DNA (1143bp) protein (381aa)
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3] Tax=GWE2_Bacteroidetes_42_39_curated
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase id=4251715 bin=GWF2_Bacteroidetes_42_66 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_17
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21696..23228
DNA (1533bp) protein (511aa)
Sodium:dicarboxylate cotransporter id=1982161 bin=GWE2_Bacteroidetes_42_39 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Di- and tricarboxylate transporter; K14445 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 Tax=GWE2_Bacteroidetes_42_39_curated
di- and tricarboxylate transporter
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_18
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23751..24914
DNA (1164bp) protein (388aa)
tolB; tol-pal system, periplasmic component TolB Tax=GWE2_Bacteroidetes_42_39_curated
WD40-like beta propeller protein id=1982160 bin=GWE2_Bacteroidetes_42_39 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
periplasmic component of the Tol biopolymer transport system
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_19
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25019..25366
DNA (348bp) protein (116aa)
PKD domain containing protein id=1982158 bin=GWE2_Bacteroidetes_42_39 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
PKD domain containing protein Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25558..26127)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=1982156 bin=GWE2_Bacteroidetes_42_39 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_21
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26418..27347)
DNA (930bp) protein (310aa)
Molybdenum cofactor synthesis domain protein id=4857432 bin=GWA2_Bacteroidetes_42_15 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
molybdenum cofactor synthesis protein Tax=GWE2_Bacteroidetes_42_39_curated
molybdenum cofactor synthesis protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_22
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27355..27813)
DNA (459bp) protein (153aa)
Molybdenum cofactor biosynthesis protein C id=1982152 bin=GWE2_Bacteroidetes_42_39 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=GWE2_Bacteroidetes_42_39_curated
moaC; molybdenum cofactor biosynthesis protein MoaC
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_23
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27854..28651)
DNA (798bp) protein (266aa)
Radical SAM domain protein id=1982150 bin=GWE2_Bacteroidetes_42_39 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
radical SAM protein; K03639 molybdenum cofactor biosynthesis protein Tax=GWE2_Bacteroidetes_42_39_curated
molybdenum cofactor biosynthesis protein MoeA
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_24
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28635..29825)
DNA (1191bp) protein (397aa)
molybdenum cofactor synthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWE2_Bacteroidetes_42_39_curated
Molybdenum cofactor synthesis domain protein id=1982148 bin=GWE2_Bacteroidetes_42_39 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
molybdenum cofactor biosysnthesis protein MoeA
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_25
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29822..30361)
DNA (540bp) protein (180aa)
Putative uncharacterized protein id=4251587 bin=GWF2_Bacteroidetes_42_66 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_26
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30726..31835
DNA (1110bp) protein (370aa)
Uncharacterized protein id=1982143 bin=GWE2_Bacteroidetes_42_39 species=Prevotella sp. oral taxon 473 genus=Alloprevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
Hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
Hypothetical protein, CF-5 family
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_27
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31880..32455)
DNA (576bp) protein (192aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=GWE2_Bacteroidetes_42_39_curated
Probable nicotinate-nucleotide adenylyltransferase id=1982141 bin=GWE2_Bacteroidetes_42_39 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
nicotinate-nucleotide adenylyltransferase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_28
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32467..33036)
DNA (570bp) protein (190aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=GWE2_Bacteroidetes_42_39_curated
Guanylate kinase id=1982139 bin=GWE2_Bacteroidetes_42_39 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
guanylate kinase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_652_29
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33162..34040)
DNA (879bp) protein (293aa)
hypothetical protein MsalJ2_12908 id=1982131 bin=GWE2_Bacteroidetes_42_39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
yicc-like domaiN-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
Displaying items 1-30 of 46 in total

View Taxonomy