ggKbase home page

GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_1
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..3994
DNA (3993bp) protein (1331aa)
Outer membrane autotransporter barrel domain id=2871320 bin=GWA2_Bacteroidetes_42_15 species=Maricaulis maris genus=Maricaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
outer membrane autotransporter
Outer membrane autotransporter barrel domain {ECO:0000313|EMBL:ABI67063.1}; Flags: Precursor;; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Ma
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4165..5160
DNA (996bp) protein (332aa)
Putative uncharacterized protein id=2068088 bin=GWE2_Bacteroidetes_42_39 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5281..5595
DNA (315bp) protein (105aa)
chorismate mutase, type IIi; K04782 isochorismate pyruvate lyase [EC:4.2.99.21] Tax=GWE2_Bacteroidetes_42_39_curated
Chorismate mutase, type II id=2068090 bin=GWE2_Bacteroidetes_42_39 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
chorismate mutase, type IIi
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5607..6557
DNA (951bp) protein (317aa)
pyruvate carboxyltransferase; K01666 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] Tax=GWE2_Bacteroidetes_42_39_curated
Pyruvate carboxyltransferase id=2871335 bin=GWA2_Bacteroidetes_42_15 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
pyruvate carboxyltransferase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6609..8405)
DNA (1797bp) protein (599aa)
transcription termination factor rho; K03628 transcription termination factor Rho Tax=GWE2_Bacteroidetes_42_39_curated
Transcription termination factor Rho id=2068094 bin=GWE2_Bacteroidetes_42_39 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
transcription termination factor Rho
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8590..8802
DNA (213bp) protein (71aa)
Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8799..9665
DNA (867bp) protein (289aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily protein id=4099783 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
RNA polymerase, sigma 70 subunit, rpod subfamily; K03086 RNA polymerase primary sigma factor Tax=GWE2_Bacteroidetes_42_39_curated
RNA polymerase sigma factor rpoD
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9723..10400
DNA (678bp) protein (226aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1) Tax=GWE2_Bacteroidetes_42_39_curated
Ribulose-phosphate 3-epimerase id=2871343 bin=GWA2_Bacteroidetes_42_15 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
ribulose-phosphate 3-epimerase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10683..13055)
DNA (2373bp) protein (791aa)
ferrous iron transport protein b; K04759 ferrous iron transport protein B Tax=GWE2_Bacteroidetes_42_39_curated
Ferrous iron transport protein B id=4099777 bin=GWF2_Bacteroidetes_42_66 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
ferrous iron transporter B
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13231..13989
DNA (759bp) protein (253aa)
Putative uncharacterized protein id=2871348 bin=GWA2_Bacteroidetes_42_15 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13976..14272
DNA (297bp) protein (99aa)
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
Putative uncharacterized protein id=2068170 bin=GWE2_Bacteroidetes_42_39 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_trna_1
unknown

Not on your lists

14347..14419
DNA (73bp)
transferRNA
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14689..14964
DNA (276bp) protein (92aa)
Helix-turn-helix domain protein id=2068171 bin=GWE2_Bacteroidetes_42_39 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
helix-turn-helix domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
helix-turn-helix domain-containing protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_13
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14970..16205
DNA (1236bp) protein (412aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=GWE2_Bacteroidetes_42_39_curated
HipA domain protein id=2068172 bin=GWE2_Bacteroidetes_42_39 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
phosphatidylinositol kinase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16478..16597)
DNA (120bp) protein (40aa)
id=2068173 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
id=2068173 Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_15
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16703..19330)
DNA (2628bp) protein (876aa)
secreted protein Tax=GWE2_Bacteroidetes_42_39_curated
Putative uncharacterized protein id=2068174 bin=GWE2_Bacteroidetes_42_39 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19374..19508
DNA (135bp) protein (45aa)
id=2068175 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
id=2068175 Tax=GWE2_Bacteroidetes_42_39_curated
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_17
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19524..21038
DNA (1515bp) protein (505aa)
pyruvate carboxylase subunit A; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=GWE2_Bacteroidetes_42_39_curated
acetyl-CoA carboxylase (EC:6.4.1.2)
pyruvate carboxylase subunit A id=4099753 bin=GWF2_Bacteroidetes_42_66 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_18
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21048..21557
DNA (510bp) protein (170aa)
Biotin-requiring enzyme id=2068177 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
acetyl-COA carboxylase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_19
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21569..23104
DNA (1536bp) protein (512aa)
Propionyl-CoA carboxylase id=4099746 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
propionyl-CoA carboxylase subunit beta Tax=GWE2_Bacteroidetes_42_39_curated
methylmalonyl-CoA carboxyltransferase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23150..23728
DNA (579bp) protein (193aa)
Redoxin domain protein id=4099742 bin=GWF2_Bacteroidetes_42_66 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
redoxin domain-containing protein Tax=GWE2_Bacteroidetes_42_39_curated
redoxin domain-containing protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_21
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23797..24345
DNA (549bp) protein (183aa)
Putative uncharacterized protein id=4099739 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Lacinutrix taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_22
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24454..25065)
DNA (612bp) protein (204aa)
Putative uncharacterized protein id=2068181 bin=GWE2_Bacteroidetes_42_39 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_23
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25130..25900)
DNA (771bp) protein (257aa)
methionine aminopeptidase A; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=GWE2_Bacteroidetes_42_39_curated
Methionine aminopeptidase id=2871517 bin=GWA2_Bacteroidetes_42_15 species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
methionine aminopeptidase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_24
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25996..26727
DNA (732bp) protein (244aa)
acyl-ACP thioesterase id=2068184 bin=GWE2_Bacteroidetes_42_39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
acyl-ACP thioesterase
GWA2_Bacteroidetes_42_15_gwa2_scaffold_1916_25
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26779..29634
DNA (2856bp) protein (952aa)
glycosyl hydrolases family 2, sugar binding domain protein Tax=GWE2_Bacteroidetes_42_39_curated
Glycosyl hydrolases family 2, sugar binding domain protein id=2068186 bin=GWE2_Bacteroidetes_42_39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
glycosyl hydrolases family 2, sugar binding domain protein
Displaying 26 items

View Taxonomy