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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(465..896)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSJ1_SIDLE
hypothetical protein; K09004 hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1218..2411)
DNA (1194bp) protein (398aa)
23S rRNA methyltransferase RlmI n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZLI4_PSEAC
SAM-dependent methyltransferase Tax=RBG_16_Gamma2_65_34_curated
SAM-dependent methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2551..3723)
DNA (1173bp) protein (391aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLZ4_NITSI
major facilitator superfamily protein Tax=RBG_16_Gamma2_65_34_curated
major facilitator superfamily protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3855..4589
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQV0_ACCPU
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4620..5168)
DNA (549bp) protein (183aa)
OsmC family protein Tax=RBG_16_Gamma2_65_34_curated
OsmC family protein
OsmC family protein id=5241775 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5226..6014)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036A5BFB
type 11 methyltransferase Tax=RBG_16_Gamma2_65_34_curated
type 11 methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6045..6494)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DSA5_THIND
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6790..8175)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000310E7A5
Methyltransferase type 11 Tax=RBG_16_Gamma2_65_34_curated
type 11 methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8395..8634)
DNA (240bp) protein (80aa)
Transmembrane anti-sigma factor n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8AZ71_9ALTE
putative transmembrane anti-sigma factor Tax=RBG_16_Gamma2_65_34_curated
anti-sigma factor
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8631..9278)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DA40F1
rpoE_[H]; RNA polymerase sigma-54 factor RpoN Tax=RBG_16_Gamma2_65_34_curated
rpoE_[H]; RNA polymerase sigma-54 factor RpoN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9408..10226)
DNA (819bp) protein (273aa)
Similar to phosphatidylethanolamine methyltransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PX31_9BACT
putative methyltransferase Tax=RBG_16_Gamma2_65_34_curated
putative methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10478..11791)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VR65_POLNA
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12216..13388
DNA (1173bp) protein (391aa)
leu/ile/val-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Gamma2_65_34_curated
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein id=14625353 bin=bin7_NC10_sister species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
leu/ile/val-binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13484..14365
DNA (882bp) protein (294aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Gamma2_65_34_curated
ABC-type transporter, integral membrane subunit id=3209649 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14355..15296
DNA (942bp) protein (314aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Gamma2_65_34_curated
ABC transporter integral membrane subunit; K01998 branched-chain amino acid transport system permease protein id=14625355 bin=bin7_NC10_sister species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15372..15731
DNA (360bp) protein (120aa)
S23 ribosomal protein n=1 Tax=Moorea producens 3L RepID=F4XND4_9CYAN
30S ribosomal protein S23 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S23
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15731..16450
DNA (720bp) protein (240aa)
neutral amino acid ABC transporter ATP-binding protein Tax=RBG_16_Gamma2_65_34_curated
ABC transport system protein id=2475300 bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
neutral amino acid ABC transporter ATP-binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16447..17175
DNA (729bp) protein (243aa)
high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF Tax=RBG_16_Gamma2_65_34_curated
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17416..17835
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUG5_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18186..18380
DNA (195bp) protein (65aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18489..21263)
DNA (2775bp) protein (925aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V0_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21752..24460)
DNA (2709bp) protein (903aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8) Tax=RBG_16_Gamma2_65_34_curated
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B219_9PROT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24905..25516
DNA (612bp) protein (204aa)
TrpR binding protein WrbA; K03809 Trp repressor binding protein Tax=RBG_16_Gamma2_65_34_curated
Flavoprotein WrbA id=3737775 bin=GWC2_Syntrophobacterales_56_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
TrpR binding protein WrbA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25654..26001
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLZ9_POLNA
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26003..26416
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3U3_AROAE
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26525..29278)
DNA (2754bp) protein (918aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9V0_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29621..32410)
DNA (2790bp) protein (930aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037BE215
signal transduction protein containing a membrane domain an EAL and a GGDEF domain Tax=RBG_16_Gamma2_65_34_curated
signal transduction protein containing a membrane domain an EAL and a GGDEF domain
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1348_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32911..33225)
DNA (315bp) protein (105aa)
RND family efflux transporter, MFP subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNU2_AZOSU
RND family efflux transporter, MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RBG_16_Gamma2_65_34_curated
RND family efflux transporter, MFP subunit
Displaying 28 items

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