ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529..864
DNA (336bp) protein (112aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

861..1616
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036B0325
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1616..3421
DNA (1806bp) protein (602aa)
V-type ATPase 116 kDa subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UIE8_9GAMM
archaeal/vacuolar-type H+-ATPase subunit I Tax=RBG_16_Gamma2_65_34_curated
archaeal/vacuolar-type H+-ATPase subunit I
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3443..3793
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00035EEA8C
ATP synthase subunit C Tax=RBG_16_Gamma2_65_34_curated
ATP synthase subunit C
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3981..4277
DNA (297bp) protein (99aa)
Archaeal/vacuolar-type H+-ATPase subunit F n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GYJ6_9GAMM
archaeal/vacuolar-type H+-ATPase subunit F Tax=RBG_16_Gamma2_65_34_curated
archaeal/vacuolar-type H+-ATPase subunit F
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4274..4870
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H070_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4975..6738
DNA (1764bp) protein (588aa)
Sodium-transporting two-sector ATPase n=1 Tax=Thiocapsa marina 5811 RepID=F9UIF2_9GAMM
archaeal/vacuolar-type H+-ATPase subunit A Tax=RBG_16_Gamma2_65_34_curated
archaeal/vacuolar-type H+-ATPase subunit A
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6777..8153
DNA (1377bp) protein (459aa)
V-type ATP synthase beta chain n=1 Tax=Thiocapsa marina 5811 RepID=F9UIF3_9GAMM
archaeal/vacuolar-type H+-ATPase subunit B Tax=RBG_16_Gamma2_65_34_curated
archaeal/vacuolar-type H+-ATPase subunit B
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8296..8889
DNA (594bp) protein (198aa)
H+transporting two-sector ATPase D subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UIF4_9GAMM
archaeal/vacuolar-type H+-ATPase subunit D Tax=RBG_16_Gamma2_65_34_curated
archaeal/vacuolar-type H+-ATPase subunit D
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8969..9508
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00035F3478
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9535..10140
DNA (606bp) protein (202aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=RBG_16_Gamma2_65_34_curated
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BM2_SOLUE
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10226..10531)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI0003806F78
osmY; osmotically-inducible protein OsmY Tax=RBG_16_Gamma2_65_34_curated
osmY; osmotically-inducible protein OsmY
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10728..11849
DNA (1122bp) protein (374aa)
(NiFe) hydrogenase, beta subunit, putative n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU94_9GAMM
(NiFe) hydrogenase subunit beta Tax=RBG_16_Gamma2_65_34_curated
(NiFe) hydrogenase subunit beta
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11864..12208
DNA (345bp) protein (115aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
Putative uncharacterized protein id=4262977 bin=GWC2_Nitrospirae_57_13 species=Oscillatoria nigro-viridis genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12208..13071
DNA (864bp) protein (288aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=3 Tax=Acidithiobacillus RepID=B5EQ54_ACIF5
oxidoreductase FAD/NAD(P)-binding domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13072..13857
DNA (786bp) protein (262aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU96_9GAMM
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=RBG_16_Gamma2_65_34_curated
NADH ubiquinone oxidoreductase 20 kDa subunit
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13850..15148
DNA (1299bp) protein (433aa)
Nickel-dependent hydrogenase large subunit n=2 Tax=Acidithiobacillus RepID=B5EQ52_ACIF5
nickel-dependent hydrogenase large subunit Tax=RBG_16_Gamma2_65_34_curated
nickel-dependent hydrogenase large subunit
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15875..16375
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003638968
vhtD; hydrogenase expression/formation protein Tax=RBG_16_Gamma2_65_34_curated
vhtD; hydrogenase expression/formation protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16613..17566
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWR6_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
ABC transporter substrate-binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17556..19712
DNA (2157bp) protein (719aa)
Sensory box/ggdef domain/eal domain protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JWR5_9GAMM
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RBG_16_Gamma2_65_34_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19761..19973
DNA (213bp) protein (71aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein id=14626224 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19970..20296
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000349AEC0
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20339..21157)
DNA (819bp) protein (273aa)
GTP cyclohydrolase FolE2 n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BDI3_9GAMM
hypothetical protein; K09007 hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21288..23183)
DNA (1896bp) protein (632aa)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4D8BB
1-deoxy-D-xylulose-5-phosphate synthase Tax=RBG_16_Gamma2_65_34_curated
1-deoxy-D-xylulose-5-phosphate synthase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23180..24073)
DNA (894bp) protein (298aa)
farnesyl-diphosphate synthase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] Tax=RBG_16_Gamma2_65_34_curated
farnesyl-diphosphate synthase (EC:2.5.1.10)
Farnesyl diphosphate synthase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BX51_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24080..24322)
DNA (243bp) protein (81aa)
xseB; exodeoxyribonuclease 7 small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=RBG_16_Gamma2_65_34_curated
exodeoxyribonuclease VII small subunit n=1 Tax=Teredinibacter turnerae RepID=UPI000379EE5D
xseB; exodeoxyribonuclease 7 small subunit
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24720..25097
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VIR4_9CYAN
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25081..25422
DNA (342bp) protein (114aa)
Transcriptional regulator, XRE family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W63_SOLUE
XRE family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
XRE family transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25804..26220)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0LCE4_MAGSM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_2517_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26217..26444)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GD12_GEOUR
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy