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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1941
DNA (1941bp) protein (647aa)
PrkA AAA domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWW6_NITHN
PrkA AAA domain-containing protein; K07180 serine protein kinase Tax=RBG_16_Gamma2_65_34_curated
PrkA AAA domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1956..3149
DNA (1194bp) protein (398aa)
UPF0229 protein Nhal_0668 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWW7_NITHN
hypothetical protein; K09786 hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3163..4593
DNA (1431bp) protein (477aa)
SpoVR family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWW8_NITHN
SpoVR family protein; K06415 stage V sporulation protein R Tax=RBG_16_Gamma2_65_34_curated
SpoVR family protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4658..5002)
DNA (345bp) protein (115aa)
DsrC family protein; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Tax=RBG_16_Gamma2_65_34_curated
tRNA 2-thiouridine synthesizing protein E (EC:2.8.1.-)
Sulfurtransferase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A833_ALKEH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5085..5756)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMM3_THIDA
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6409..7113
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000367C26C
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7501..8010
DNA (510bp) protein (170aa)
Heat shock protein Hsp20 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4N2_NITHN
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Gamma2_65_34_curated
heat shock protein Hsp20
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8021..8581
DNA (561bp) protein (187aa)
Cold-shock protein DNA-binding Tax=RBG_16_Gamma2_65_34_curated
Cold-shock protein DNA-binding protein id=2314580 bin=GWA2_OP3_52_12 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Cold-shock protein DNA-binding
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8878..9219
DNA (342bp) protein (114aa)
noxC3; nitroreductase (EC:1.-.-.-) Tax=RBG_16_Gamma2_65_34_curated
nfsA3; nitroreductase (EC:1.-.-.-)
Putative nitroreductase MJ1384 n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KXH0_METBM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9241..9789
DNA (549bp) protein (183aa)
peptidase C56, PfpI; K05520 protease I [EC:3.2.-.-] Tax=RBG_16_Gamma2_65_34_curated
Intracellular protease, PfpI family id=3253017 bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
intracellular protease, PfpI family
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9757..10182)
DNA (426bp) protein (142aa)
cheR; CheR methyltransferase SAM-binding domain-containing protein (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=RBG_16_Gamma2_65_34_curated
cheR; chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein methyltransferase CheR protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TW37_9DELT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10670..10945)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI0003812B93
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10956..11507)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3N1_NITHN
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_31253_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11551..12048)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003607CE5
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
Displaying 14 items

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