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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..647)
DNA (645bp) protein (215aa)
ABC transporter n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003697FB3
putative ABC transporter ATP-binding protein Tax=RBG_16_Gamma2_65_34_curated
putative ABC transporter ATP-binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(672..1160)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSK0_SIDLE
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1319..1687)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKJ9_AZOSU
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1999..2538
DNA (540bp) protein (180aa)
CBS domain containing membrane protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPJ1_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2791..3738)
DNA (948bp) protein (316aa)
ROK family protein; K00847 fructokinase [EC:2.7.1.4] Tax=RBG_16_Gamma2_65_34_curated
ROK family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFQ0_NITSI
ROK family protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3940..4656)
DNA (717bp) protein (239aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein id=12497507 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4730..5347
DNA (618bp) protein (206aa)
Putative aspartyl protease n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21F23_SACD2
hypothetical protein; K06985 aspartyl protease family protein Tax=RBG_16_Gamma2_65_34_curated
putative aspartyl protease precursor
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5378..6097
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM93_9DELT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6140..6907
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BTU9_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7073..8308
DNA (1236bp) protein (412aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GWV6_9GAMM
lipoprotein release ABC transporter permease Tax=RBG_16_Gamma2_65_34_curated
lipoprotein release ABC transporter permease
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8312..9541
DNA (1230bp) protein (410aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H0Y5_9GAMM
lipoprotein release ABC transporter permease Tax=RBG_16_Gamma2_65_34_curated
lipoprotein release ABC transporter permease
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9544..10233
DNA (690bp) protein (230aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Gamma2_65_34_curated
macrolide ABC transporter ATP-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B5A390
ABC transporter
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10214..11560
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2D5_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11908..12864)
DNA (957bp) protein (319aa)
Carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein n=1 Tax=mine drainage metagenome RepID=E6QTH3_9ZZZZ
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=RBG_16_Gamma2_65_34_curated
hydrogenase expression/formation protein HypE
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13359..15383
DNA (2025bp) protein (675aa)
Putative Vitamin B12 transporter btuB (Cobalamin receptor)(BtuB) n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8P441_RALSL
Vitamin B12 transporter btuB precursor (Cobalamin receptor)(btuB); K02014 iron complex outermembrane recepter protein Tax=RBG_16_Gamma2_65_34_curated
putative Vitamin B12 transporter btuB precursor (Cobalamin receptor)(btuB)
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15391..15915
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2N3_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15924..17996
DNA (2073bp) protein (691aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AG39_9PROT
diguanylate cyclase/phosphodiesterase Tax=RBG_16_Gamma2_65_34_curated
diguanylate cyclase/phosphodiesterase rbh
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18179..20440)
DNA (2262bp) protein (754aa)
Carbamoyltransferase hypF (Carbamoyl phosphate-converting enzyme hypF) ((NiFe)-hydrogenase maturation factor hypF) (Hydrogenase maturation protein hypF) n=1 Tax=mine drainage metagenome RepID=E6QTH4_9ZZZZ
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF Tax=RBG_16_Gamma2_65_34_curated
(NiFe) hydrogenase maturation protein HypF rbh
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20656..21003)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KRK2_9GAMM
SPW repeat protein Tax=RBG_16_Gamma2_65_34_curated
putative membrane protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21197..21544)
DNA (348bp) protein (116aa)
SPW repeat protein n=1 Tax=Thermus oshimai JL-2 RepID=K7QYD1_THEOS
SPW repeat protein Tax=RBG_16_Gamma2_65_34_curated
SPW repeat protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21729..23207)
DNA (1479bp) protein (493aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE37_GALCS
polyphosphate:AMP phosphotransferase Tax=RBG_16_Gamma2_65_34_curated
polyphosphate:AMP phosphotransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23394..25355
DNA (1962bp) protein (654aa)
outer membrane receptor for ferrienterochelin and colicins Tax=RBG_16_Gamma2_65_34_curated
TonB-dependent receptor id=4819228 bin=GWC2_Syntrophus__56_31 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
outer membrane receptor for ferrienterochelin and colicins
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25364..26317
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SWJ9_META2
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26327..29191
DNA (2865bp) protein (955aa)
barA; BarA (EC:2.7.13.3) Tax=RBG_16_Gamma2_65_34_curated
barA; BarA (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase id=3872748 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29188..31311
DNA (2124bp) protein (708aa)
Sensory response regulator with diguanylate cyclase domain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG45_9BACT
sensory response regulator with diguanylate cyclase domain Tax=RBG_16_Gamma2_65_34_curated
sensory response regulator with diguanylate cyclase domain
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31452..33173)
DNA (1722bp) protein (574aa)
hoxX; hydrogenase maturation factor hoxX (EC:2.1.2.9); K00936 [EC:2.7.3.-] Tax=RBG_16_Gamma2_65_34_curated
hoxX; hydrogenase maturation factor hoxX (EC:2.1.2.9)
Hydrogenase maturation factor hoxX n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LN52_RALME
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33327..34475)
DNA (1149bp) protein (383aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYK8_9PROT
hydrogenase expression/formation protein hypD2; K04654 hydrogenase expression/formation protein HypD Tax=RBG_16_Gamma2_65_34_curated
hypD; hydrogenase expression/formation protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34459..34716)
DNA (258bp) protein (86aa)
Hydrogenase assembly chaperon n=1 Tax=Azoarcus sp. KH32C RepID=H0PT34_9RHOO
hypC; hydrogenase assembly chaperon Tax=RBG_16_Gamma2_65_34_curated
hypC; hydrogenase assembly chaperon
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34759..35547)
DNA (789bp) protein (263aa)
hydrogenase nickel incorporation protein HypB n=1 Tax=Thiobacillus thioparus RepID=UPI00037762BD
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB Tax=RBG_16_Gamma2_65_34_curated
hydrogenase accessory protein HypB
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_238_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35612..35986)
DNA (375bp) protein (125aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Thiocapsa marina 5811 RepID=F9UCG6_9GAMM
hydrogenase expression/synthesis HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=RBG_16_Gamma2_65_34_curated
hydrogenase nickel incorporation protein HypA
Displaying items 1-30 of 33 in total

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