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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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74..694
DNA (621bp) protein (207aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
Putative uncharacterized protein id=3699620 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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808..1362
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BWM5_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1366..2574)
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=RBG_16_Gamma2_65_34_curated
Uncharacterized protein id=14429637 bin=bin3_NC10 species=Leptospira broomii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin3_NC10 organism_group=NC10
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2796..3776)
DNA (981bp) protein (327aa)
bioB; biotin synthase (EC:2.8.1.6) Tax=RBG_16_Gamma2_65_34_curated
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJF1_9PROT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4072..4833)
DNA (762bp) protein (254aa)
transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000367F174
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein Tax=RBG_16_Gamma2_65_34_curated
Crp/Fnr family transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4950..5594
DNA (645bp) protein (215aa)
Methyltransferase type 11 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EM31_ACIF5
type 11 methyltransferase Tax=RBG_16_Gamma2_65_34_curated
type 11 methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5658..7046)
DNA (1389bp) protein (463aa)
hemN; oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RBG_16_Gamma2_65_34_curated
Coproporphyrinogen-III oxidase n=1 Tax=Beggiatoa alba B18LD RepID=I3CJM5_9GAMM
oxygen-independent coproporphyrinogen III oxidase HemN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7231..8700)
DNA (1470bp) protein (490aa)
UbiD family decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RBG_16_Gamma2_65_34_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WH03_9GAMM
UbiD family decarboxylase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8784..9290
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037F36CD
lipid carrier protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9367..9621
DNA (255bp) protein (85aa)
Putative transcriptional regulator, CopG family n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UKG5_CELFN
CopG family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
CopG family transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9618..10058
DNA (441bp) protein (147aa)
PIN domain family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B04E
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
UPF0129 protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10091..10978)
DNA (888bp) protein (296aa)
peptidase U32; K01423 [EC:3.4.-.-] Tax=RBG_16_Gamma2_65_34_curated
Peptidase U32 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIE2_9PROT
peptidase U32
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11064..12107)
DNA (1044bp) protein (348aa)
peptidase u32; K08303 putative protease [EC:3.4.-.-] id=5082988 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
peptidase U32 Tax=RBG_16_Gamma2_65_34_curated
peptidase U32
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_15186_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12221..12580)
DNA (360bp) protein (120aa)
DsrC family protein; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Tax=RBG_16_Gamma2_65_34_curated
DsrC family protein; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] id=5080920 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
DsrC family protein
Displaying 14 items

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