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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3..656
DNA (654bp) protein (218aa)
Putative ABC transport protein, ATP-binding component n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QEC8_BORBO
ABC transporter ATP-binding protein Tax=RBG_16_Gamma2_65_34_curated
ABC transporter ATP-binding protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

662..1366
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00038236B1
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Gamma2_65_34_curated
ABC transporter
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..4162)
DNA (2691bp) protein (897aa)
UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RBG_16_Gamma2_65_34_curated
UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A7H8_ALKEH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4188..5048)
DNA (861bp) protein (287aa)
methionine aminopeptidase, type I; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Gamma2_65_34_curated
Methionine aminopeptidase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVW0_NITHN
methionine aminopeptidase, type I
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5232..6152
DNA (921bp) protein (307aa)
30S ribosomal protein S2 n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035D65B8
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S2
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6248..7132
DNA (885bp) protein (295aa)
Elongation factor Ts n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0R2_HALNC
translation elongation factor Ts; K02357 elongation factor Ts Tax=RBG_16_Gamma2_65_34_curated
translation elongation factor Ts
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7136..7864
DNA (729bp) protein (243aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Gamma2_65_34_curated
Uridylate kinase n=4 Tax=root RepID=B5EQQ0_ACIF5
uridylate kinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7867..8433
DNA (567bp) protein (189aa)
ribosome recycling factor n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C215C
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RBG_16_Gamma2_65_34_curated
frr; ribosome recycling factor
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8453..9205
DNA (753bp) protein (251aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RBG_16_Gamma2_65_34_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase id=1362212 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9198..10034
DNA (837bp) protein (279aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RBG_16_Gamma2_65_34_curated
Phosphatidate cytidylyltransferase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DAH4_9GAMM
phosphatidate cytidylyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10031..10156
DNA (126bp) protein (42aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10153..11376
DNA (1224bp) protein (408aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=uncultured gamma proteobacterium RepID=H5SMG6_9GAMM
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=RBG_16_Gamma2_65_34_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11373..12734
DNA (1362bp) protein (454aa)
membrane-associated zinc protein metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Gamma2_65_34_curated
peptidase n=1 Tax=Thioalkalivibrio RepID=UPI00036D1E4B
membrane-associated zinc protein metalloprotease
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12773..15055
DNA (2283bp) protein (761aa)
Outer membrane protein assembly factor BamA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACC0_9PROT
surface antigen (D15) Tax=RBG_16_Gamma2_65_34_curated
surface antigen (D15)
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15058..15594
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037419C3
outer membrane chaperone Skp; K06142 outer membrane protein Tax=RBG_16_Gamma2_65_34_curated
outer membrane protein OmpH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15601..16638
DNA (1038bp) protein (346aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RBG_16_Gamma2_65_34_curated
lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4I0_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16635..17081
DNA (447bp) protein (149aa)
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RBG_16_Gamma2_65_34_curated
3-hydroxyacyl-ACP dehydratase n=1 Tax=Kangiella aquimarina RepID=UPI00037CA3F4
3-hydroxyacyl-ACP dehydratase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17096..17866
DNA (771bp) protein (257aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RBG_16_Gamma2_65_34_curated
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTL2_ACCPU
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17891..19072
DNA (1182bp) protein (394aa)
lpxB; lipid-a-disaccharide synthase; K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=RBG_16_Gamma2_65_34_curated
Lipid-A-disaccharide synthase n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QPU3_METS6
lpxB; lipid-a-disaccharide synthase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19069..19665
DNA (597bp) protein (199aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RBG_16_Gamma2_65_34_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=sulfur-oxidizing symbionts RepID=G2DAI2_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19803..23261
DNA (3459bp) protein (1153aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RBG_16_Gamma2_65_34_curated
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQ67_THISH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23380..24339
DNA (960bp) protein (320aa)
accA; acetyl-CoA carboxylase, carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RBG_16_Gamma2_65_34_curated
acetyl-CoA carboxylase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BS38_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24326..25735
DNA (1410bp) protein (470aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RBG_16_Gamma2_65_34_curated
tRNA(Ile)-lysidine synthase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B33FA4
tRNA(Ile)-lysidine synthetase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25832..27484
DNA (1653bp) protein (551aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RBG_16_Gamma2_65_34_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=PYRG_THISH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27481..28329
DNA (849bp) protein (283aa)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DDK9_9GAMM
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase Tax=RBG_16_Gamma2_65_34_curated
2-dehydro-3-deoxyphosphooctonate aldolase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28462..29754
DNA (1293bp) protein (431aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Gamma2_65_34_curated
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=12498067 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
enolase (EC:4.2.1.11)
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29820..30143
DNA (324bp) protein (108aa)
Cell division protein FtsB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N9_NITMU
septum formation initiator; K05589 cell division protein FtsB Tax=RBG_16_Gamma2_65_34_curated
septum formation initiator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30322..30942)
DNA (621bp) protein (207aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30939..31403)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037FB844
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_5485_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31477..31596)
DNA (120bp) protein (40aa)
Tax=RBG_16_Gamma2_65_34_curated
Displaying items 1-30 of 31 in total

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