ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1189)
DNA (1188bp) protein (396aa)
glucose/sorbosone dehydrogenase-like protein Tax=RBG_16_Gamma2_65_34_curated
Glucose/sorbosone dehydrogenase id=3289309 bin=GWC2_Deltaproteobacteria_42_51 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
glucose/sorbosone dehydrogenase-like protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1234..2334)
DNA (1101bp) protein (367aa)
galactose-1-phosphate uridyl transferase, class I (EC:2.7.7.10); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=RBG_16_Gamma2_65_34_curated
galactose-1-phosphate uridyl transferase, class I (EC:2.7.7.10); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=12498011 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
galactose-1-phosphate uridyl transferase, class I (EC:2.7.7.10)
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2476..3039
DNA (564bp) protein (188aa)
dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RBG_16_Gamma2_65_34_curated
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DC55_9GAMM
dihydrodipicolinate synthase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3116..3355
DNA (240bp) protein (80aa)
dihydrodipicolinate synthase (EC:4.3.3.7) Tax=RBG_16_Gamma2_65_34_curated
dihydrodipicolinate synthase (EC:4.3.3.7)
dihydrodipicolinate synthase n=1 Tax=Pseudomonas caeni RepID=UPI0003B740FE
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3385..4521
DNA (1137bp) protein (379aa)
Putative lipoprotein n=1 Tax=Thauera sp. 63 RepID=N6Y5I7_9RHOO
lipoprotein; K07287 lipoprotein-34 Tax=RBG_16_Gamma2_65_34_curated
lipoprotein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4666..5493
DNA (828bp) protein (276aa)
Ribonuclease J protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2E264_9GAMM
beta-lactamase domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
beta-lactamase domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5510..9502
DNA (3993bp) protein (1331aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Gamma2_65_34_curated
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Methylobacillus flagellatus RepID=PUR4_METFK
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9793..10011
DNA (219bp) protein (73aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10367..10648
DNA (282bp) protein (94aa)
Putative transcriptional regulator n=1 Tax=Ralstonia pickettii OR214 RepID=R0DN16_RALPI
helix-turn-helix domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
helix-turn-helix domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10651..10932
DNA (282bp) protein (94aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11161..11787
DNA (627bp) protein (209aa)
Lytic transglycosylase catalytic n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E4F0_9GAMM
lytic transglycosylase domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
vII; soluble lytic murein transglycosylase precursor
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12060..12362
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000363E0AB
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12498..13709)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABG7_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13806..14228)
DNA (423bp) protein (141aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
GxxExxY protein id=3924883 bin=GWF2_Ignavibacteria_35_20 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14321..15397)
DNA (1077bp) protein (359aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RV98_ALLVD
ATPase family protein associated with various cellular activities (AAA) Tax=RBG_16_Gamma2_65_34_curated
ATPase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15564..15875
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PTF7_9RHOO
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16278..17165
DNA (888bp) protein (296aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein id=24592126 bin=RBG_19FT_COMBO_GAL15_69_19 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17263..17640)
DNA (378bp) protein (126aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein n=3 Tax=mine drainage metagenome RepID=T1D772_9ZZZZ
transposase IS204/IS1001/IS1096/IS1165 family protein Tax=RBG_16_Gamma2_65_34_curated
transposase IS204/IS1001/IS1096/IS1165 family protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17689..19116
DNA (1428bp) protein (476aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
Uncharacterized protein involved in outer membrane biogenesis-like id=1360589 bin=GWE1_T_denit_62_9 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19160..20401)
DNA (1242bp) protein (414aa)
Fe-S oxidoreductase Tax=RBG_16_Gamma2_65_34_curated
Fe-S oxidoreductase id=14426657 bin=bin1_lowGC species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Fe-S oxidoreductase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20541..20945)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z617_DESAT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21158..21469)
DNA (312bp) protein (104aa)
Transport-associated protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9R4_9PROT
transport-associated protein Tax=RBG_16_Gamma2_65_34_curated
transport-associated protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21538..21762)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EDC3_9BURK
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21949..22683
DNA (735bp) protein (245aa)
Transcriptional regulator-like protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GN68_CUPNN
transcriptional regulator-like protein Tax=RBG_16_Gamma2_65_34_curated
transcriptional regulator-like protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22680..23537
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D825C
putative Crp/Fnr family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
transcriptional regulator, Crp/Fnr family
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23569..23664)
DNA (96bp) protein (32aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23737..24480)
DNA (744bp) protein (248aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLI0_NITSI
Crp/Fnr family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
Crp/Fnr family transcriptional regulator rbh
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24505..25329)
DNA (825bp) protein (275aa)
Putative PAS/PAC sensor protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GLI1_NITSI
putative PAS/PAC sensor protein Tax=RBG_16_Gamma2_65_34_curated
histidine kinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25326..27032)
DNA (1707bp) protein (569aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-) Tax=RBG_16_Gamma2_65_34_curated
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AY1_POLSJ
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_340_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27845..29788
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZIP8_TERRK
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
Displaying items 1-30 of 44 in total

View Taxonomy