ggKbase home page

RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..238)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035F0096
TRAP-type C4-dicarboxylate transport system, periplasmic component Tax=RBG_16_Gamma2_65_34_curated
TRAP-type C4-dicarboxylate transport system, periplasmic component
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

614..1549
DNA (936bp) protein (312aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
Uncharacterized protein id=2008090 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1559..2566)
DNA (1008bp) protein (336aa)
Lysine 2,3-aminomutase (EC:5.4.3.2) Tax=RBG_16_Gamma2_65_34_curated
Lysine 2,3-aminomutase (EC:5.4.3.2) rbh
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035E1625
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2793..3362
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZWU8_METMM
elongation factor P; K02356 elongation factor P Tax=RBG_16_Gamma2_65_34_curated
elongation factor P
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3452..4297
DNA (846bp) protein (282aa)
Micrococcal nuclease (EC:3.1.31.1) Tax=RBG_16_Gamma2_65_34_curated
Micrococcal nuclease (EC:3.1.31.1)
Putative Micrococcal nuclease n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG79_9BACT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4378..5364
DNA (987bp) protein (329aa)
poxB regulator PoxA; K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RBG_16_Gamma2_65_34_curated
Lysyl-tRNA synthetase-related protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DHG4_9GAMM
poxB regulator PoxA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5551..6906)
DNA (1356bp) protein (452aa)
histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] Tax=RBG_16_Gamma2_65_34_curated
Histidine kinase id=1941782 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
histidine kinase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6899..7567)
DNA (669bp) protein (223aa)
transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=RBG_16_Gamma2_65_34_curated
Two component transcriptional regulator, winged helix family id=1941779 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7657..8265)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037038D5
cytochrome b561/heavy metal translocating P-type ATPase fusion protein Tax=RBG_16_Gamma2_65_34_curated
cytochrome b561/heavy metal translocating P-type ATPase fusion protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8277..8768)
DNA (492bp) protein (164aa)
Diheme cytochrome c n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQL6_SIDLE
cytochrome C Tax=RBG_16_Gamma2_65_34_curated
cytochrome C
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8781..9191)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQL7_SIDLE
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9338..9775)
DNA (438bp) protein (146aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=RBG_16_Gamma2_65_34_curated
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured bacterium RepID=G3C5S2_9BACT
D-tyrosyl-tRNA(Tyr) deacylase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10075..10413
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBR5_SORCE
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_4148_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10432..11262)
DNA (831bp) protein (277aa)
Protein creA n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBL0_9GAMM
endonuclease/exonuclease/phosphatase; K06896 Tax=RBG_16_Gamma2_65_34_curated
endonuclease/exonuclease/phosphatase
Displaying 14 items

View Taxonomy