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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2..466
DNA (465bp) protein (155aa)
Predicted transposase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BR58_9GAMM
putative transposase; K07491 putative transposase Tax=RBG_16_Gamma2_65_34_curated
putative transposase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

536..1612
DNA (1077bp) protein (359aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1656..2255)
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K8V1_NITWC
flavoprotein WrbA; K03809 Trp repressor binding protein Tax=RBG_16_Gamma2_65_34_curated
flavodoxin/nitric oxide synthase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2255..2602)
DNA (348bp) protein (116aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1] Tax=RBG_16_Gamma2_65_34_curated
Arsenate reductase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUK6_THISH
arsenate reductase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2765..3205
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Thioalkalivibrio RepID=B8GUK4_THISH
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3265..4176
DNA (912bp) protein (304aa)
UPF0761 membrane protein G114_11380 n=1 Tax=Aeromonas diversa 2478-85 RepID=N9VKD0_9GAMM
ribonuclease BN Tax=RBG_16_Gamma2_65_34_curated
ribonuclease BN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4155..5741)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJG8_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5956..7365)
DNA (1410bp) protein (470aa)
aspA; aspartate ammonia-lyase (EC:4.2.1.2); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=RBG_16_Gamma2_65_34_curated
aspA; aspartate ammonia-lyase (EC:4.2.1.2)
Aspartate ammonia-lyase id=1368050 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7447..7959
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6HCZ1_9GAMM
thioredoxin Tax=RBG_16_Gamma2_65_34_curated
thioredoxin
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8175..8447
DNA (273bp) protein (91aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RBG_16_Gamma2_65_34_curated
acylphosphatase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037F31AA
acylphosphatase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8523..8945
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037F7AD5
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8929..9414
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LRL5_BURGS
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9507..10103)
DNA (597bp) protein (199aa)
Soluble lytic murein transglycosylase and related regulatory protein (Some contain LysM/invasin domains) n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SD06_HAHCH
lytic murein transglycosylase Tax=RBG_16_Gamma2_65_34_curated
lytic murein transglycosylase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10635..12845
DNA (2211bp) protein (737aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RBG_16_Gamma2_65_34_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
Putative GTP pyrophosphokinase RelA n=1 Tax=uncultured bacterium 9F08 RepID=D2XIR7_9BACT
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12909..13604)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WZ58_METML
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13645..15255)
DNA (1611bp) protein (537aa)
nitrite reductase (EC:1.7.2.1); K15864 nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] Tax=RBG_16_Gamma2_65_34_curated
nitrite reductase (EC:1.7.2.1)
Nitrite reductase (NO-forming) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMM0_THIDA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15255..16469)
DNA (1215bp) protein (405aa)
Elongator protein 3/MiaB/NifB n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML9_THIDA
Elongator protein 3/MiaB/NifB Tax=RBG_16_Gamma2_65_34_curated
Elongator protein 3/MiaB/NifB
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16593..17120)
DNA (528bp) protein (176aa)
Possible Transcriptional Regulator, AsnC family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML8_THIDA
AsnC family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
AsnC family transcriptional regulator
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17117..17560)
DNA (444bp) protein (148aa)
Heme biosynthesis protein n=1 Tax=Beggiatoa sp. PS RepID=A7BW24_9GAMM
AsnC family transcriptional regulator Tax=RBG_16_Gamma2_65_34_curated
heme d1 biosynthesis protein NirG
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17592..18119)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036753DE
nirL_[H]; Heme d1 biosynthesis protein NirD / Heme d1 biosynthesis protein NirL Tax=RBG_16_Gamma2_65_34_curated
nirL_[H]; Heme d1 biosynthesis protein NirD / Heme d1 biosynthesis protein NirL
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18212..18673)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036E4587
nirD_[H]; Heme d1 biosynthesis protein NirD / Heme d1 biosynthesis protein NirL Tax=RBG_16_Gamma2_65_34_curated
nirD; Protein nirD
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18691..19881)
DNA (1191bp) protein (397aa)
Putative heme D1 biosynthesis protein NirF n=1 Tax=uncultured bacterium 888 RepID=B8R8P4_9BACT
heme d1 biosynthesis protein NirF Tax=RBG_16_Gamma2_65_34_curated
heme d1 biosynthesis protein NirF
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19871..20230)
DNA (360bp) protein (120aa)
cytochrome C55X precursor NirC n=1 Tax=Thiobacillus denitrificans RepID=UPI00036666EE
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20291..22033)
DNA (1743bp) protein (581aa)
nitrite reductase (EC:1.7.2.1); K15864 nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] Tax=RBG_16_Gamma2_65_34_curated
nitrite reductase (EC:1.7.2.1)
Nitrite reductase (NO-forming) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SML5_THIDA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22449..22772
DNA (324bp) protein (108aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23139..23798
DNA (660bp) protein (220aa)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein LinasL1_09615 id=3960252 bin=GWA2_Methylomirabilis_73_35 species=Sphingopyxis sp. MC1 genus=Sphingopyxis taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_17367_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24441..24638
DNA (198bp) protein (66aa)
Tax=RBG_16_Gamma2_65_34_curated
Displaying 27 items

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