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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_18

Organism: Candidatus Muproteobacteria bacterium RBG_16_65_34

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 5 / 38
Location: 11934..12200

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Xenorhabdus bovienii (strain SS-2004) RepID=D3UYU3_XENBS similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 83.0
  • Bit_score: 129
  • Evalue 1.20e-27
hfq; host factor I for bacteriophage Q beta replication, plays a role in degradation of RNA transcripts; K03666 host factor-I protein Tax=RBG_16_Gamma2_65_34_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 88.0
  • Bit_score: 176
  • Evalue 1.20e-41
hfq; Protein hfq similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 83.0
  • Bit_score: 130
  • Evalue 2.60e-28

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Taxonomy

RBG_16_Gamma2_65_34_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAGCCAGCAAAAGGGGCAAGCGCTACAAGACCCTTTCCTTAATGTCTTGCGCAAGGAGCACGTCCCGGTATCCATCTTTTTGGTCAATGGCATCAAGTTACAGGGGCAGATCGAGTCCTTTGACCAGTTCGTGGTGCTGCTCAAGAATTCGGTGAGCCAGATGATCTACAAGCACGCGATTTCGACGGTTGTGCCCAGCCGCCCCGTAAAATTTCACATTGAGAACTCCGACGTCGATACCACCAAAGGACCCGGAAACGAATAG
PROTEIN sequence
Length: 89
MSQQKGQALQDPFLNVLRKEHVPVSIFLVNGIKLQGQIESFDQFVVLLKNSVSQMIYKHAISTVVPSRPVKFHIENSDVDTTKGPGNE*