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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..129)
DNA (129bp) protein (43aa)
UPF0234 protein Alvin_0368 n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RN45_ALLVD
hypothetical protein; K09767 hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(312..1064)
DNA (753bp) protein (251aa)
Integral membrane protein TerC n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C234_NITHN
integral membrane protein TerC Tax=RBG_16_Gamma2_65_34_curated
integral membrane protein TerC
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1120..1680)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000314C685
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
conserved membrane protein of unknown function
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1822..2238)
DNA (417bp) protein (139aa)
Glyoxalase n=2 Tax=Pandoraea RepID=V5UAE9_9BURK
glyoxalase/bleomycin resistance protein/dioxygenase; K06991 Tax=RBG_16_Gamma2_65_34_curated
glyoxalase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2340..2738)
DNA (399bp) protein (133aa)
selR; peptide methionine sulfoxide reductase (R-isomer-specific); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RBG_16_Gamma2_65_34_curated
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AK49_GEOSK
selR; peptide methionine sulfoxide reductase, R-isomer-specific
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2754..3428)
DNA (675bp) protein (225aa)
2OG-Fe(II) oxygenase; K07336 PKHD-type hydroxylase [EC:1.14.11.-] Tax=RBG_16_Gamma2_65_34_curated
2OG-Fe(II) oxygenase n=1 Tax=uncultured bacterium ws643C1 RepID=I1X540_9BACT
nuclease PIN
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3516..4229)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036D6560
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4229..4375)
DNA (147bp) protein (49aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4384..5466)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=uncultured bacterium ws643C1 RepID=I1X546_9BACT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5676..5876
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00038214AC
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5906..6334)
DNA (429bp) protein (143aa)
Sel1 domain protein repeat-containing protein n=1 Tax=uncultured bacterium ws172H5 RepID=I1X4W7_9BACT
Sel1 repeat protein Tax=RBG_16_Gamma2_65_34_curated
Sel1 repeat protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6527..7090
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DJA7_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7213..7500)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035C2F62
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7525..8283
DNA (759bp) protein (253aa)
Peptide chain release factor 2 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRJ1_THISH
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RBG_16_Gamma2_65_34_curated
peptide chain release factor 2
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8325..9827
DNA (1503bp) protein (501aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RBG_16_Gamma2_65_34_curated
Lysine--tRNA ligase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FC26_9GAMM
lysyl-tRNA synthetase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9921..10790)
DNA (870bp) protein (290aa)
Metal-dependent hydrolase HDOD n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX22_NITHN
metal-dependent hydrolase HDOD Tax=RBG_16_Gamma2_65_34_curated
metal-dependent hydrolase HDOD
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10835..11860
DNA (1026bp) protein (342aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RBG_16_Gamma2_65_34_curated
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=MIAA_THISH
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11934..12200
DNA (267bp) protein (89aa)
RNA-binding protein Hfq n=1 Tax=Xenorhabdus bovienii (strain SS-2004) RepID=D3UYU3_XENBS
hfq; host factor I for bacteriophage Q beta replication, plays a role in degradation of RNA transcripts; K03666 host factor-I protein Tax=RBG_16_Gamma2_65_34_curated
hfq; Protein hfq
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12256..13533
DNA (1278bp) protein (426aa)
GTPase HflX n=1 Tax=Methylomicrobium album BG8 RepID=H8GLS5_METAL
GTPase; K03665 GTP-binding protein HflX Tax=RBG_16_Gamma2_65_34_curated
GTPase HflX
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13582..14796
DNA (1215bp) protein (405aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] Tax=RBG_16_Gamma2_65_34_curated
Protease FtsH subunit HflK n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBW8_NITMU
HflK protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..15662
DNA (870bp) protein (290aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-] Tax=RBG_16_Gamma2_65_34_curated
Protein HflC n=2 Tax=Methylovorus RepID=C6XEF9_METSD
HflC protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15676..15861
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ALN7_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15887..17074
DNA (1188bp) protein (396aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLP9_9GAMM
ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=RBG_16_Gamma2_65_34_curated
hisZ; ATP phosphoribosyltransferase regulatory subunit
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17195..18487
DNA (1293bp) protein (431aa)
purA_[H]; Adenylosuccinate synthetase (EC:6.3.4.4) Tax=RBG_16_Gamma2_65_34_curated
purA_[H]; Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRM2_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_trna_1
unknown

Not on your lists

comp(18560..18641)
DNA (82bp)
transferRNA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18709..20958
DNA (2250bp) protein (750aa)
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] Tax=RBG_16_Gamma2_65_34_curated
ribonuclease R (EC:3.1.13.1)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037722D8
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20961..21707
DNA (747bp) protein (249aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RBG_16_Gamma2_65_34_curated
23S rRNA (guanosine-2''''-O-)-methyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036EE7AD
TrmH family RNA methyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22301..22423
DNA (123bp) protein (41aa)
phnA; protein phnA; K06193 phosphonoacetate hydrolase [EC:3.11.1.2] Tax=RBG_16_Gamma2_65_34_curated
phosphonoacetate hydrolase n=1 Tax=Halomonas jeotgali RepID=UPI000376319D
phnA; alkylphosphonate uptake protein PhnA
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22491..23216
DNA (726bp) protein (242aa)
Putative zinc protease n=1 Tax=Dehalococcoides sp. (strain CBDB1) RepID=Q3ZWI0_DEHSC
zinc protease; K07043 Tax=RBG_16_Gamma2_65_34_curated
zinc protease
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_7846_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23213..23431
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2P6_HERAR
RNA-binding protein; K14761 ribosome-associated protein Tax=RBG_16_Gamma2_65_34_curated
RNA-binding protein
Displaying items 1-30 of 40 in total

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