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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_13

Organism: Candidatus Muproteobacteria bacterium RBG_16_65_34

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 5 / 38
Location: 12448..13305

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KIH9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 289.0
  • Bit_score: 331
  • Evalue 1.20e-87
rpoH; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor Tax=RBG_16_Gamma2_65_34_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 285.0
  • Bit_score: 557
  • Evalue 1.10e-155
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 285.0
  • Bit_score: 330
  • Evalue 5.60e-88

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Taxonomy

RBG_16_Gamma2_65_34_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACGACCCAATCTCTGGCGCTGGCCATCAACCTTTATCCGGAAAAGGGCCTCGCCGCCTACATCAAAGCCGTGAACGCCCTGCCGGTCCTGACGGCCGAGGAGGAGCGGCGGCTCGCGCGGCGCTATCTTCGCCAGAACGATCTCGAGGCCGCCCGGCAACTGGTGCTCTCGAACCTGCGCTATGTGGTGCACGTCGCCCGCGGCTTCTCGGGCTACGGGCTGCCGCAGGCGGACCTCATCCAGGAAGGCAACATCGGCCTGATGAAGGCCGTGAAGCACTACGACCCGAGCCGCAAGGTGCGGCTGATGTCGTTCGCCATCCACTGGGTCCGCGCCGAGGTCTACGACTACATCCTGCGCAACTGGCGCATCGTCAAGGTCGCGACGACCAAAGGACAGCGCAAGCTCTTCTTCAACCTGCGCAAGTCCCGCACGCGCCTCGGCTGGATGAACCGTGGCGAGGTCGATGCGCTCGCCACGACCCTGAACGTGACGCCGGAGACGGTGCGGGAGATGGAGGGGCGGATGAGCAACGCCGACGTGCCGTTCGACGCCGAGAGCGATGCCGATGACGAGACCTTCCGCGCCGCGCCGTCGGGCTACCTCCAGGACATGCGCTATAACCCGGAGGTGCTGGCGACCCAATCCGACCAGGAGAGCGCGCGCGCCGAGAACCTCAAGACCGCGCTCGCCGCGCTCGATGCACGCGCGCGCGACATCGTCCAACGCCGCTGGCTCGACGAGGAGAAACCGACGCTGCACGAACTTGCCGCCGAGTACGGCGTTTCCGCCGAGCGCATCCGCCAGATCGAGGCCAAGGCGCTGACCGCCATGAAAGACGTGCTCGCGGCTTAA
PROTEIN sequence
Length: 286
MTTQSLALAINLYPEKGLAAYIKAVNALPVLTAEEERRLARRYLRQNDLEAARQLVLSNLRYVVHVARGFSGYGLPQADLIQEGNIGLMKAVKHYDPSRKVRLMSFAIHWVRAEVYDYILRNWRIVKVATTKGQRKLFFNLRKSRTRLGWMNRGEVDALATTLNVTPETVREMEGRMSNADVPFDAESDADDETFRAAPSGYLQDMRYNPEVLATQSDQESARAENLKTALAALDARARDIVQRRWLDEEKPTLHELAAEYGVSAERIRQIEAKALTAMKDVLAA*