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RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1294
DNA (1293bp) protein (431aa)
ABC transporter n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B45D17
ABC transporter Tax=RBG_16_Gamma2_65_34_curated
ABC transporter
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1301..2152
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TB57_9GAMM
Uncharacterized protein Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2241..3053
DNA (813bp) protein (271aa)
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18) Tax=RBG_16_Gamma2_65_34_curated
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036DC580
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3174..5201
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7M2_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5273..5527)
DNA (255bp) protein (85aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZKN7_9RHOO
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5569..6048)
DNA (480bp) protein (160aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RBG_16_Gamma2_65_34_curated
Phosphopantetheine adenylyltransferase n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2K4I4_9GAMM
phosphopantetheine adenylyltransferase
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6101..6742)
DNA (642bp) protein (214aa)
methyltransferase (EC:2.1.1.52); K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] Tax=RBG_16_Gamma2_65_34_curated
rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD (EC:2.1.1.171)
hypothetical protein n=1 Tax=Pseudomonas thermotolerans RepID=UPI0003625D53
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6735..8003)
DNA (1269bp) protein (423aa)
Peptidase M16 domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C572_NITHN
peptidase M16 domain-containing protein Tax=RBG_16_Gamma2_65_34_curated
peptidase M16 domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8212..9576)
DNA (1365bp) protein (455aa)
peptidase M16-like protein; K01422 [EC:3.4.99.-] Tax=RBG_16_Gamma2_65_34_curated
Signal recognition particle-docking protein FtsY n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2D9A4_9GAMM
peptidase M16-like protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9655..10623
DNA (969bp) protein (323aa)
Signal recognition particle receptor FtsY n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6S6_NITWC
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RBG_16_Gamma2_65_34_curated
signal recognition particle-docking protein FtsY
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10745..11416
DNA (672bp) protein (224aa)
ATPase involved in cell division n=3 Tax=Cycloclasticus RepID=K0C5P7_CYCSP
ATPase cell division Tax=RBG_16_Gamma2_65_34_curated
Cell division ATP-binding protein FtsE
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11413..12327
DNA (915bp) protein (305aa)
Cell division protein FtsX n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BVR9_9GAMM
hypothetical protein; K09811 cell division transport system permease protein Tax=RBG_16_Gamma2_65_34_curated
cell division protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12448..13305
DNA (858bp) protein (286aa)
RNA polymerase sigma factor RpoH n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KIH9_9GAMM
rpoH; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor Tax=RBG_16_Gamma2_65_34_curated
rpoH; RNA polymerase factor sigma-32
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13599..14438
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SNR9_METPP
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14623..15648)
DNA (1026bp) protein (342aa)
fibronectin, type III Tax=RBG_16_Gamma2_65_34_curated
lipoprotein cytochrome c
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15773..16408)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4Q9_NITHN
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16466..17500)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L094_9GAMM
Putative uncharacterized protein Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17658..18725)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXF2_9GAMM
Uncharacterized protein Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18727..18954)
DNA (228bp) protein (76aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18956..19843)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DE46_9GAMM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20209..20490)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGI8_9PROT
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20500..22695)
DNA (2196bp) protein (732aa)
UPF0313 protein SCD_n02308 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIN8_9PROT
radical SAM protein Tax=RBG_16_Gamma2_65_34_curated
radical SAM protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23050..24540
DNA (1491bp) protein (497aa)
FAD linked oxidase domain-containing protein; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RBG_16_Gamma2_65_34_curated
FAD-binding protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036EE7D7
FAD linked oxidase domain-containing protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24607..25662
DNA (1056bp) protein (352aa)
glcE; glycolate oxidase FAD binding subunit (EC:1.1.2.4); K11472 glycolate oxidase FAD binding subunit Tax=RBG_16_Gamma2_65_34_curated
glcE; glycolate oxidase FAD binding subunit (EC:1.1.2.4)
Glycolate oxidase, subunit GlcE n=1 Tax=Beggiatoa sp. PS RepID=A7BXW4_9GAMM
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25729..26025
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. C1S70 RepID=U7NZU1_9ALTE
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26022..26246
DNA (225bp) protein (75aa)
Zinc finger, YgiT-type n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V4K0_9CYAN
zinc finger protein Tax=RBG_16_Gamma2_65_34_curated
zinc finger protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26313..26747
DNA (435bp) protein (145aa)
Tax=RBG_16_Gamma2_65_34_curated
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27071..28330)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX60_NITHN
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28670..30004)
DNA (1335bp) protein (445aa)
Type III effector Hrp-dependent outers n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTM1_THISH
Hrp-dependent type III effector protein Tax=RBG_16_Gamma2_65_34_curated
Hrp-dependent type III effector protein
RBG_16_Gammaproteobacteria_65_34_RBG_16_scaffold_1116_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30132..30554)
DNA (423bp) protein (141aa)
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JN95_SYNJB
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein Tax=RBG_16_Gamma2_65_34_curated
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase family protein
Displaying 30 items

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