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RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_1
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

458..805
DNA (348bp) protein (116aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_2
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

903..998
DNA (96bp) protein (32aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_3
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

1106..2194
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ECL1_9BACT
Radical SAM domain protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Radical SAM domain protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_4
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

2279..2668
DNA (390bp) protein (130aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_5
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

2755..3609
DNA (855bp) protein (285aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_6
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(3622..4446)
DNA (825bp) protein (275aa)
Chorismate mutase I / Prephenate dehydratase (EC:5.4.99.5 4.2.1.51); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
chorismate mutase I / Prephenate dehydratase (EC:5.4.99.5 4.2.1.51)
Prephenate dehydratase id=3540289 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_7
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(4466..4873)
DNA (408bp) protein (136aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_8
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(4929..5615)
DNA (687bp) protein (229aa)
winged helix family two component transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain id=14631134 bin=bin9_gal15 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
winged helix family two component transcriptional regulator
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_9
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(5734..6693)
DNA (960bp) protein (320aa)
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPHIGHO2_02_FULL_Melainaba
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q205_CALOW
integral membrane sensor signal transduction histidine kinase
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_10
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(6840..9278)
DNA (2439bp) protein (813aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EX35_9BACT
ATP-dependent DNA helicase RecG
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_11
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(9275..9388)
DNA (114bp) protein (38aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_12
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(9584..10816)
DNA (1233bp) protein (411aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_13
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

10983..11393
DNA (411bp) protein (137aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTK7_9GAMM
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
Glyoxalase family protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_14
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

11514..12440
DNA (927bp) protein (309aa)
agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
agmatinase (EC:3.5.3.11)
Agmatinase id=2431455 bin=GWC2_Deltaproteobacteria_55_46 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_15
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(12371..13072)
DNA (702bp) protein (234aa)
bioD; dethiobiotin synthase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
bioD; dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD id=4114816 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_16
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(13204..14367)
DNA (1164bp) protein (388aa)
cell division protein FtsZ n=1 Tax=cyanobacterium PCC 7702 RepID=UPI0003708153
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
cell division protein FtsZ
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_17
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(14686..15705)
DNA (1020bp) protein (340aa)
ribosome small subunit-dependent GTPase A; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
ribosome small subunit-dependent GTPase A; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] id=19042 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
ribosome small subunit-dependent GTPase A
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_18
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(15702..16445)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JJA9_9FIRM
BioY family protein; K03523 putative biotin biosynthesis protein BioY Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
BioY family protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_19
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

16600..17427
DNA (828bp) protein (276aa)
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2FD36_TRIVA
viral A-type inclusion protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_20
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

17582..18568
DNA (987bp) protein (329aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:780 RepID=R5Q9E3_9CLOT
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
rpoD; RNA polymerase sigma factor RpoD
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_21
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

18993..19781
DNA (789bp) protein (263aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_22
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(20294..21085)
DNA (792bp) protein (264aa)
Phospholipase, patatin family n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0STE5_9DELT
patatin; K07001 NTE family protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_23
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

21170..22444
DNA (1275bp) protein (425aa)
Tlr1758 protein n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DI34_THEEB
transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_24
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

22441..23799
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YZP3_9CYAN id=19754 bin=ACD20 species=Lyngbya sp. PCC 8106 genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
glycosyl transferase family 2 Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
glycosyl transferase family 2
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_25
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

24075..25331
DNA (1257bp) protein (419aa)
thiamine pyrophosphate enzyme (EC:4.1.1.74); K04103 indolepyruvate decarboxylase [EC:4.1.1.74] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
thiamine pyrophosphate enzyme (EC:4.1.1.74)
Thiamine pyrophosphate enzyme n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5M2_ANAVT
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_26
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(25352..26230)
DNA (879bp) protein (293aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] id=18254 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_27
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

26284..27771
DNA (1488bp) protein (496aa)
Putative unusual protein kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIU1_CHLTF
protein kinase Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
protein kinase
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_trna_1
unknown

Not on your lists

27800..27872
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_28
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(27934..28269)
DNA (336bp) protein (112aa)
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
RIFCSPHIGHO2_02_FULL_CP_34_12_rifcsphigho2_02_scaffold_3056_29
R_Melainabacteria_34_12, Melainabacteria, Bacteria

Not on your lists

comp(28448..29113)
DNA (666bp) protein (222aa)
CmpX protein n=1 Tax=uncultured bacterium RepID=K2F1M7_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
hypothetical protein
Displaying items 1-30 of 32 in total

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