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RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_1
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(167..1660)
DNA (1494bp) protein (498aa)
hypothetical protein; K06915 Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Putative uncharacterized protein id=1889345 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_2
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1750..2475
DNA (726bp) protein (242aa)
hypothetical protein Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
Probable transcriptional regulatory protein Galf_2594 id=1889347 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2528..3085
DNA (558bp) protein (186aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC id=2139060 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3082..4023
DNA (942bp) protein (314aa)
UbiA prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
UbiA prenyltransferase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMR7_SIDLE
UbiA prenyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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4029..4610
DNA (582bp) protein (194aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Holliday junction ATP-dependent DNA helicase RuvA id=1993491 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Holliday junction DNA helicase RuvA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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4649..4924
DNA (276bp) protein (92aa)
Plasmid stabilization system n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRA9_ACCPU
plasmid stabilization system Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
plasmid stabilization system
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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4921..5289
DNA (369bp) protein (123aa)
Transcriptional regulator, XRE family protein n=1 Tax=uncultured bacterium RepID=K1WX16_9BACT
XRE family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
XRE family transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5291..6352
DNA (1062bp) protein (354aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMR9_SIDLE
Holliday junction DNA helicase RuvB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6440..6646
DNA (207bp) protein (69aa)
AbrB family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00037320C7
AbrB family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
AbrB family transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6643..7020
DNA (378bp) protein (126aa)
PilT domain-containing protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLF9_THISH
PilT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PilT domain-containing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7017..9038
DNA (2022bp) protein (674aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5L5_9BURK
DNA methylase N-4/N-6 domain protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
DNA methylase N-4/N-6 domain protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9035..9322
DNA (288bp) protein (96aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9319..12030
DNA (2712bp) protein (904aa)
DEAD-like helicase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5L4_9BURK
type III restriction protein res subunit Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
type III restriction protein res subunit
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_14
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12027..13538
DNA (1512bp) protein (504aa)
putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
AAA-4 family protein id=4300347 bin=GWC2_Geobacteraceae_55_20 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
putative transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13983..14393
DNA (411bp) protein (137aa)
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Tol-pal system-associated acyl-CoA thioesterase id=1993493 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
tol-pal system-associated acyl-CoA thioesterase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14410..15087
DNA (678bp) protein (226aa)
protein TolQ; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Protein TolQ id=1993494 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
protein TolQ
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15084..15518
DNA (435bp) protein (145aa)
protein TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Protein TolR id=1993495 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
protein TolR
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15515..16276
DNA (762bp) protein (254aa)
Protein TolA n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCK1_GALCS
protein TolA Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
protein TolA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16290..17555
DNA (1266bp) protein (422aa)
Protein TolB n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCK0_GALCS
Tol-Pal system beta propeller repeat-containing protein TolB; K03641 TolB protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Tol-Pal system beta propeller repeat-containing protein TolB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17586..18104
DNA (519bp) protein (173aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCJ9_GALCS
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
peptidoglycan-associated lipoprotein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_21
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18129..18884
DNA (756bp) protein (252aa)
Tol-pal system protein YbgF n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCJ8_GALCS
tol-pal system protein YbgF Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
tol-pal system protein YbgF
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_22
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18892..19608
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00036D6519
radical SAM protein; K10026 queuosine biosynthesis protein QueE Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
radical SAM protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_23
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19625..20302
DNA (678bp) protein (226aa)
7-cyano-7-deazaguanine synthase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCJ6_GALCS
exsB protein; K06920 queuosine biosynthesis protein QueC Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
exsB protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_trna_1
unknown

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20381..20451
DNA (71bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_6680_24
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20944..21198)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Displaying 25 items

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