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RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2..334
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C2045
thioredoxin family protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
thioredoxin family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_2
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

412..834
DNA (423bp) protein (141aa)
Rhodanese domain protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Rhodanese-like protein id=1319183 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Rhodanese domain protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1005..2261)
DNA (1257bp) protein (419aa)
transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Transcription termination factor Rho id=1878832 bin=GWE2_Gallionellales_58_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
transcription termination factor Rho
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2415..2741)
DNA (327bp) protein (109aa)
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Thioredoxin id=1878831 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
thioredoxin
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2828..3415)
DNA (588bp) protein (196aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
NUDIX hydrolase id=1878830 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
NUDIX hydrolase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3397..4200)
DNA (804bp) protein (268aa)
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Outer membrane protein assembly factor BamD id=1878829 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
outer membrane assembly lipoprotein YfiO
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4220..5191
DNA (972bp) protein (324aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Pseudouridine synthase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SI23_GALCS
RluA family pseudouridine synthase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5178..5927
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTV3_SIDLE
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6026..7630
DNA (1605bp) protein (535aa)
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
NAD+ synthetase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFI9_GALCS
NAD+ synthetase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7702..8532
DNA (831bp) protein (277aa)
ABC transporter n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABM1_9PROT
ABC transporter Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
ABC transporter
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8662..8844)
DNA (183bp) protein (61aa)
YcfA family protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BGE2_CHLPD
hypothetical protein; K07339 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8841..9050)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BGE1_CHLPD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9436..10095
DNA (660bp) protein (220aa)
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Segregation and condensation protein A id=1911833 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
chromosome segregation and condensation protein ScpA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_14
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10135..10734
DNA (600bp) protein (200aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Chromosome segregation and condensation protein, ScpB id=1911835 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
chromosome segregation and condensation protein ScpB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11009..13039
DNA (2031bp) protein (677aa)
Ligand-gated TonB-dependent outer membrane channel n=2 Tax=Geobacter metallireducens RepID=Q39V24_GEOMG
TonB-dependent receptor, plug; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
ligand-gated TonB-dependent outer membrane channel
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13113..13655
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39V25_GEOMG
transmembrane protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13652..15814
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EE20C3
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15957..17585)
DNA (1629bp) protein (543aa)
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFU7_GALCS
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17746..19908)
DNA (2163bp) protein (721aa)
1,4-alpha-glucan-branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFU6_GALCS
1,4-alpha-glucan-branching protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19982..21319
DNA (1338bp) protein (446aa)
glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Glucose-1-phosphate adenylyltransferase id=2079829 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
glucose-1-phosphate adenylyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_21
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21348..23066
DNA (1719bp) protein (573aa)
glycoside hydrolase family protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Glycoside hydrolase family 57 id=2079827 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
glycoside hydrolase family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_22
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23094..25121
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AM04_9PROT
amyA; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
amyA; hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_23
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25173..26687
DNA (1515bp) protein (505aa)
Cyclic nucleotide-regulated small mechanosensitive ion channel n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRQ5_SIDLE
cyclic nucleotide-regulated small mechanosensitive ion channel Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
cyclic nucleotide-regulated small mechanosensitive ion channel
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_24
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26884..27849
DNA (966bp) protein (322aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFY0_GALCS
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_25
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28226..29650
DNA (1425bp) protein (475aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
tRNA(Ile)-lysidine synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRQ7_SIDLE
tRNA(Ile)-lysidine synthetase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_26
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29760..30482
DNA (723bp) protein (241aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVP4_9GAMM
transcriptional regulator, Crp/Fnr family Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
transcriptional regulator, Crp/Fnr family
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_27
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30581..33625
DNA (3045bp) protein (1015aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000361A106
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PAS/PAC sensor hybrid histidine kinase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_28
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33622..34464
DNA (843bp) protein (281aa)
Putative PAS/PAC sensor protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVP2_9GAMM
putative PAS/PAC sensor protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
putative PAS/PAC sensor protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_29
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35072..38710
DNA (3639bp) protein (1213aa)
signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PAS/PAC sensor hybrid histidine kinase id=3964842 bin=GWC2_ACD39_50_8 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
signal transduction histidine kinase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_4293_30
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38707..39567
DNA (861bp) protein (287aa)
Response regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y716_9PROT
response regulator; K07814 putative two-component system response regulator Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
response regulator
Displaying items 1-30 of 46 in total

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