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RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1..984
DNA (984bp) protein (328aa)
Putative oxidoreductase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EHC7_BRASB
oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
oxidoreductase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_2
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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984..1124
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1085..3067
DNA (1983bp) protein (661aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTX7_SIDLE
3-phosphoshikimate 1-carboxyvinyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3192..4859
DNA (1668bp) protein (556aa)
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
30S ribosomal protein S1 id=2110019 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
30S ribosomal protein S1
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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4913..5164
DNA (252bp) protein (84aa)
integration host factor subunit beta; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Integration host factor subunit beta id=2110017 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
integration host factor subunit beta
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5258..5554
DNA (297bp) protein (99aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Putative uncharacterized protein id=2110015 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5570..6745
DNA (1176bp) protein (392aa)
tetratricopeptide TPR_2 repeat protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Tetratricopeptide TPR_2 repeat protein id=2110014 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
tetratricopeptide TPR_2 repeat protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6742..7443
DNA (702bp) protein (234aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=2110013 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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7466..8431
DNA (966bp) protein (322aa)
rfaE bifunctional protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RfaE bifunctional protein id=2110012 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
rfaE bifunctional protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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8495..9493
DNA (999bp) protein (333aa)
ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=Proteobacteria RepID=UPI00037D9C75
ADP-L-glycero-D-manno-heptose-6-epimerase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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9767..10654
DNA (888bp) protein (296aa)
cysteine synthase; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Cysteine synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CR24_SIDLE
cysteine synthase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11178..11450)
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11469..11705)
DNA (237bp) protein (79aa)
Transcriptional regulator, CopG family n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQG2_SIDLE
CopG family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
CopG family transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_14
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12006..13379)
DNA (1374bp) protein (458aa)
MiaB-like tRNA modifying enzyme YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Ribosomal protein S12 methylthiotransferase RimO id=1965200 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
MiaB-like tRNA modifying enzyme YliG
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13572..15758
DNA (2187bp) protein (729aa)
glycerate kinase (EC:2.7.1.31); K00050 hydroxypyruvate reductase [EC:1.1.1.81] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glycerate kinase (EC:2.7.1.31)
Putative hydroxypyruvate reductase (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QVY3_9ZZZZ
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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15755..17014
DNA (1260bp) protein (420aa)
putative glycosyl transferase, family 2 (EC:2.4.-.-) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
putative glycosyl transferase, family 2 (EC:2.4.-.-)
Putative Glycosyl transferase, family 2 id=1959803 bin=GWE2_Gallionellales_58_10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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17052..17756
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Putative uncharacterized protein id=1959805 bin=GWE2_Gallionellales_58_10 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17769..18977
DNA (1209bp) protein (403aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Uncharacterized protein id=1959807 bin=GWE2_Gallionellales_58_10 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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19221..20093
DNA (873bp) protein (291aa)
PfkB; K00847 fructokinase [EC:2.7.1.4] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PfkB; K00847 fructokinase [EC:2.7.1.4] id=12493773 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PfkB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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20090..22246
DNA (2157bp) protein (719aa)
sucrose-phosphate phosphatase (EC:2.4.1.14); K00696 sucrose-phosphate synthase [EC:2.4.1.14] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
sucrose-phosphate phosphatase (EC:2.4.1.14)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003798335
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_21
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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22243..24621
DNA (2379bp) protein (793aa)
sucrose synthase (EC:2.4.1.13); K00695 sucrose synthase [EC:2.4.1.13] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
sucrose synthase (EC:2.4.1.13)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003729A6F
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_22
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(24753..25511)
DNA (759bp) protein (253aa)
YcgR family protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Flagellar brake protein YcgR id=2035678 bin=GWE2_Gallionellales_58_10 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
YcgR family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_23
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25798..27249)
DNA (1452bp) protein (484aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
glycine dehydrogenase subunit 2 n=2 Tax=Proteobacteria RepID=UPI00036D0B88
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_24
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27362..27865)
DNA (504bp) protein (168aa)
tpx; thiol peroxidase (EC:1.11.1.-); K11065 thiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Thiol peroxidase, Tpx-type (EC:1.11.1.15)
Probable thiol peroxidase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SE60_9BURK
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_25
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27885..29237)
DNA (1353bp) protein (451aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
hypothetical protein n=2 Tax=Proteobacteria RepID=UPI00037623B2
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_26
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(29340..29729)
DNA (390bp) protein (130aa)
glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Glycine cleavage system H protein id=2900927 bin=GWA2__Bacteriovorax-rel_49_15 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
glycine cleavage system H protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_27
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29759..31024)
DNA (1266bp) protein (422aa)
glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Aminomethyltransferase id=2900929 bin=GWA2__Bacteriovorax-rel_49_15 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
glycine cleavage system T protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_28
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31442..32392)
DNA (951bp) protein (317aa)
protein-(glutamine-N5) methyltransferase, release factor-specific; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037E4B15
protein-(glutamine-N5) methyltransferase, release factor-specific
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_29
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32507..32872)
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5888_30
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33106..33930
DNA (825bp) protein (275aa)
UDP pyrophosphate phosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
UDP pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=2 Tax=Thauera RepID=N6YES8_9RHOO
Displaying items 1-30 of 44 in total

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