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RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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152..2788
DNA (2637bp) protein (879aa)
type III restriction enzyme, res subunit; K01156 type III restriction enzyme [EC:3.1.21.5] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Type III restriction enzyme, res subunit id=3513583 bin=GWF2_Geobacter_54_21 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
type III restriction enzyme, res subunit
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_2
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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2798..3400
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SD67_GALCS
5-formyltetrahydrofolate cyclo-ligase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3644..6481
DNA (2838bp) protein (946aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Pyruvate dehydrogenase E1 component n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SD68_GALCS
2-oxo-acid dehydrogenase E1 subunit, homodimeric type
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6493..7968
DNA (1476bp) protein (492aa)
branched-chain alpha-keto acid dehydrogenase subunit E2; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_cur
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YC54_NITMU
branched-chain alpha-keto acid dehydrogenase subunit E2
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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8064..8723
DNA (660bp) protein (220aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase id=2073715 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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8717..9079
DNA (363bp) protein (121aa)
Ribosomal silencing factor RsfS n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SD71_GALCS
iojap family protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
iojap family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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9195..9665
DNA (471bp) protein (157aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Ribosomal RNA large subunit methyltransferase H id=2073719 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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9675..10295
DNA (621bp) protein (207aa)
maf protein; K06287 septum formation protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Maf-like protein Galf_2675 id=2073742 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
maf protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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10317..11771
DNA (1455bp) protein (485aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
ribonuclease G n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00035E37AB
ribonuclease, Rne/Rng family
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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11974..12102
DNA (129bp) protein (43aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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12099..13163
DNA (1065bp) protein (355aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
dTDP-glucose 4,6-dehydratase n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XWB8_PSEFL
dTDP-glucose 4,6-dehydratase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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13163..14059
DNA (897bp) protein (299aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AHW9_9PROT
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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14062..14952
DNA (891bp) protein (297aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SDZ8_GALCS
glucose-1-phosphate thymidylyltransferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_14
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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14949..15494
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SDZ7_GALCS
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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15585..16439
DNA (855bp) protein (285aa)
RNA polymerase sigma 70 n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003798010
RNA polymerase, sigma 32 subunit, RpoH; K03089 RNA polymerase sigma-32 factor Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RNA polymerase, sigma 32 subunit, RpoH
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16763..17152)
DNA (390bp) protein (130aa)
Stringent starvation protein B n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SC35_GALCS
stringent starvation protein B; K03600 stringent starvation protein B Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
stringent starvation protein B
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17198..17794)
DNA (597bp) protein (199aa)
RegF n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00035E44F7
glutathione S-transferase; K03599 RNA polymerase-associated protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glutathione S-transferase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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18178..18831
DNA (654bp) protein (218aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curate
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase id=1940819 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5537_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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18911..20239
DNA (1329bp) protein (443aa)
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Type I secretion outer membrane protein, TolC family id=1940822 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
TolC family type I secretion outer membrane protein
Displaying 19 items

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