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RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3..644
DNA (642bp) protein (214aa)
glutamyl-tRNA(Gln) amidotransferase, B subunit; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glutamyl-tRNA amidotransferase subunit B n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00036BF15F
glutamyl-tRNA(Gln) amidotransferase, B subunit
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_2
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(868..1494)
DNA (627bp) protein (209aa)
Thiol:disulfide interchange protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIH0_GALCS
DSBA oxidoreductase; K03673 thiol:disulfide interchange protein DsbA Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
DSBA oxidoreductase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1531..2160)
DNA (630bp) protein (210aa)
Sporulation domain-containing protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIG9_GALCS
sporulation domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
sporulation domain-containing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2172..3935)
DNA (1764bp) protein (588aa)
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Arginine--tRNA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJW6_9PROT
arginyl-tRNA synthetase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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4151..5407
DNA (1257bp) protein (419aa)
2-nitropropane dioxygenase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
2-nitropropane dioxygenase NPD id=2047842 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
2-nitropropane dioxygenase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5514..5804
DNA (291bp) protein (97aa)
molecular chaperone GroES n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037276AA
groES; chaperonin GroES Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
molecular chaperone GroES
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5832..7475
DNA (1644bp) protein (548aa)
chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
60 kDa chaperonin id=2047844 bin=GWE2_Gallionellales_58_10 species=unknown genus=unknown taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
chaperonin GroEL
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_trna_1
unknown

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7741..7813
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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7878..9533
DNA (1656bp) protein (552aa)
Peptide chain release factor 3 n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCP9_GALCS
peptide chain release factor 3; K02837 peptide chain release factor 3 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
peptide chain release factor 3
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9577..10536)
DNA (960bp) protein (320aa)
transcriptional regulator, LysR family Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Transcriptional regulator, LysR family id=1910502 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
transcriptional regulator, LysR family
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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10648..12027
DNA (1380bp) protein (460aa)
cbbM; ribulose bisphosphate carboxylase, large subunit (EC:4.1.1.39) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
cbbM; ribulose bisphosphate carboxylase, large subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase id=1910500 bin=GWE2_Gallionellales_58_10 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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12195..12998
DNA (804bp) protein (268aa)
ATPase; K04748 nitric oxide reductase NorQ protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
CbbQ/NirQ/NorQ domain protein id=1910445 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
ATPase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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13210..15510
DNA (2301bp) protein (767aa)
von Willebrand factor type A n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTG0_SIDLE
von Willebrand factor type A Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
von Willebrand factor type A
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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15680..16681
DNA (1002bp) protein (334aa)
inositol phosphatase/fructose-16-bisphosphatase; K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Fructose-1,6-bisphosphatase class 1 id=1910430 bin=GWE2_Gallionellales_58_10 species=unknown genus=unknown taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
inositol phosphatase/fructose-16-bisphosphatase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_14
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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16684..17178
DNA (495bp) protein (165aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase id=1910428 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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17231..17626
DNA (396bp) protein (132aa)
Phosphate-starvation-inducible E n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACT5_9PROT
phosphate-starvation-inducible E Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
phosphate-starvation-inducible E
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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17742..18629
DNA (888bp) protein (296aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curate
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=1910426 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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18640..19269
DNA (630bp) protein (210aa)
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
carbonate dehydratase (EC:4.2.1.1)
Carbonate dehydratase id=1910425 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19270..19878)
DNA (609bp) protein (203aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Putative uncharacterized protein id=1910423 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19865..20518)
DNA (654bp) protein (218aa)
orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHQ4_GALCS
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_5902_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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20587..21324
DNA (738bp) protein (246aa)
exodeoxyribonuclease III Xth (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
exodeoxyribonuclease III Xth (EC:4.2.99.18)
Exodeoxyribonuclease III Xth n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHQ5_GALCS
Displaying 21 items

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