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RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1090
DNA (1089bp) protein (363aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
threonyl-tRNA synthetase n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037805BC
threonyl-tRNA synthetase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_2
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1164..1655
DNA (492bp) protein (164aa)
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Translation initiation factor IF-3 id=2036116 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
translation initiation factor IF-3
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_3
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1785..1982
DNA (198bp) protein (66aa)
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
50S ribosomal protein L35 id=2036117 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
50S ribosomal protein L35
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1993..2352
DNA (360bp) protein (120aa)
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
50S ribosomal protein L20 id=2036118 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
50S ribosomal protein L20
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_5
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2436..3455
DNA (1020bp) protein (340aa)
phenylalanyl-tRNA synthetase subunit alpha Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Phenylalanine--tRNA ligase alpha subunit id=2036119 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
phenylalanyl-tRNA synthetase subunit alpha
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_6
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3466..5823
DNA (2358bp) protein (786aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Phenylalanine--tRNA ligase beta subunit id=2036121 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
phenylalanyl-tRNA synthetase subunit beta
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_7
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5833..6144
DNA (312bp) protein (104aa)
integration host factor, subunit alpha; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Integration host factor subunit alpha id=2036122 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
integration host factor, subunit alpha
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_8
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6125..6490
DNA (366bp) protein (122aa)
MerR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Transcriptional regulator, MerR family id=2036123 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
MerR family transcriptional regulator
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_trna_1
unknown

Not on your lists

6534..6607
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_9
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6749..8344)
DNA (1596bp) protein (532aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E3B5_GEOLS
GAF sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
GAF sensor-containing diguanylate cyclase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_10
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8365..10827)
DNA (2463bp) protein (821aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI69_9PROT
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_11
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11017..11937
DNA (921bp) protein (307aa)
6-phosphogluconate dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
6-phosphogluconate dehydrogenase-like protein id=1934043 bin=GWE2_Gallionellales_58_10 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
6-phosphogluconate dehydrogenase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_12
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11934..13439
DNA (1506bp) protein (502aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase id=1934045 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13444..14436
DNA (993bp) protein (331aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ55_SIDLE
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_14
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14433..15116
DNA (684bp) protein (228aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
6-phosphogluconolactonase id=1934049 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
6-phosphogluconolactonase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15166..15381
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_16
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15403..17964
DNA (2562bp) protein (854aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase id=1934050 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17968..19428
DNA (1461bp) protein (487aa)
glycogen/starch synthase; K00703 starch synthase [EC:2.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Glycogen synthase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFQ7_GALCS
glycogen/starch synthase
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_18
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19478..20131
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2A3_THIK1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20203..21756)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=beta proteobacterium CB RepID=M1SFN7_9PROT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21914..23755)
DNA (1842bp) protein (614aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA43_9PROT
ATP-dependent DNA helicase RecQ Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
ATP-dependent DNA helicase RecQ
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_21
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23794..24597)
DNA (804bp) protein (268aa)
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
tRNA/rRNA methyltransferase (SpoU) id=2185421 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
tRNA/rRNA methyltransferase SpoU
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_22
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24594..25364)
DNA (771bp) protein (257aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Chromosome segregation and condensation protein, ScpB id=1911835 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
chromosome segregation and condensation protein ScpB
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_23
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25330..26136)
DNA (807bp) protein (269aa)
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Segregation and condensation protein A id=1911833 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
chromosome segregation and condensation protein ScpA
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_24
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26250..27452)
DNA (1203bp) protein (401aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=1911831 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_25
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27457..28104)
DNA (648bp) protein (216aa)
peptidase M50 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Peptidase M50 id=1911829 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
peptidase M50
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_26
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28101..28730)
DNA (630bp) protein (210aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Sua5/YciO/YrdC/YwlC family protein id=1911827 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Sua5/YciO/YrdC/YwlC family protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_27
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28730..29602)
DNA (873bp) protein (291aa)
PHP domain-containing protein; K07053 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PHP domain protein id=1911825 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
PHP domain-containing protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_28
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29602..29925)
DNA (324bp) protein (108aa)
hypothetical protein; K09801 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Protein RnfH id=1911823 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
RIFCSPLOWO2_02_FULL_Betaproteobacteria_59_110_rifcsplowo2_02_scaffold_2132_29
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29922..30359)
DNA (438bp) protein (146aa)
cyclase/dehydrase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
Cyclase/dehydrase id=1911821 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
cyclase/dehydrase
Displaying items 1-30 of 32 in total

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