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RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_1
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

2..112
DNA (111bp) protein (37aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(187..816)
DNA (630bp) protein (210aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

1310..1660
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Putative uncharacterized protein id=4731970 bin=GWC2_OD1_43_27 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

1657..1995
DNA (339bp) protein (113aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein id=5084979 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(2257..2592)
DNA (336bp) protein (112aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

2916..3827
DNA (912bp) protein (304aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3839..4237)
DNA (399bp) protein (133aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

4447..6915
DNA (2469bp) protein (823aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7142..7978)
DNA (837bp) protein (279aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


comp(8122..8721)
DNA (600bp) protein (200aa)
30S ribosomal protein S4 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3Q5_9FIRM
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
30S ribosomal protein S4
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(8778..9608)
DNA (831bp) protein (277aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(9611..10447)
DNA (837bp) protein (279aa)
Diaminopimelate epimerase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HAK2_9SPIR
diaminopimelate epimerase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
diaminopimelate epimerase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(10514..11443)
DNA (930bp) protein (310aa)
ldcA; Muramoyltetrapeptide carboxypeptidase; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Muramoyltetrapeptide carboxypeptidase id=4617846 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ldcA; Muramoyltetrapeptide carboxypeptidase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

11448..12335
DNA (888bp) protein (296aa)
Bifunctional protein FolD n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VH15_9CYAN
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclo
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

12332..13522
DNA (1191bp) protein (397aa)
three-deoxy-d-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=RIFCSPLOWO2_12_FULL_Mel
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MG21_9BACT id=17715 bin=ACD20 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
three-deoxy-d-manno-octulosonic-acid transferase domain-containing protein
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

13479..14585
DNA (1107bp) protein (369aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003700041
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(14530..15528)
DNA (999bp) protein (333aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
DNA polymerase III subunit delta
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_18
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(15528..16631)
DNA (1104bp) protein (368aa)
alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DLV9_9FIRM
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16776..18080)
DNA (1305bp) protein (435aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
cyc:PCC7424_3131 clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=17997 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(18284..18961)
DNA (678bp) protein (226aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ATP-dependent Clp protease proteolytic subunit 1 n=1 Tax=Prochlorococcus marinus subsp. marinus str. CCMP1375 RepID=CLPP1_PROMA id=471471 bin=MEL_C2 species=Prochlorococcus marinus genus=Prochlorococcus taxon_order=Prochlorales taxon_class=unknown phylum=Cyanobacteria tax=MEL_C2 organism_group=Melainabacteria
ATP-dependent Clp protease, proteolytic subunit ClpP
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(19032..20357)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Caldibacillus debilis RepID=UPI0003662DC2
tig; trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
tig; trigger factor
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(20377..20667)
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(20642..21643)
DNA (1002bp) protein (334aa)
3-oxoacyl-ACP synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
3-oxoacyl-ACP synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=uncultured bacterium RepID=K2EBI4_9BACT
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(21656..22663)
DNA (1008bp) protein (336aa)
Phosphate acyltransferase n=1 Tax=uncultured bacterium RepID=K2EY12_9BACT
phosphate:acyl-(acyl carrier protein) acyltransferase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
phosphate:acyl-(acyl carrier protein) acyltransferase
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


comp(22720..22920)
DNA (201bp) protein (67aa)
50S ribosomal protein L32 n=20 Tax=Bifidobacterium RepID=RL32_BIFLD
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
50S ribosomal protein L32
RIFCSPLOWO2_12_FULL_CP_35_11_rifcsplowo2_12_scaffold_3972_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

23016..24173
DNA (1158bp) protein (386aa)
Glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
glycyl-tRNA synthetase subunit beta n=1 Tax=[Clostridium] glycolicum RepID=UPI0003775222
Displaying 26 items

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