ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..353
DNA (351bp) protein (117aa)
Proprotein convertase P id=4074853 bin=GWF2_Bacteroidetes_40_13 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(641..1807)
DNA (1167bp) protein (389aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=2001202 bin=GWD2_Bacteroidetes_40_43 species=Nitratifractor salsuginis genus=Nitratifractor taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
fad-dependent pyridine nucleotide-disulfide oxidoreductase Tax=GWE2_Bacteroidetes_40_63_curated
fad-dependent pyridine nucleotide-disulfide oxidoreductase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2029..2556)
DNA (528bp) protein (176aa)
Thioredoxin id=4074849 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
thioredoxin Tax=GWE2_Bacteroidetes_40_63_curated
thioredoxin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2595..2795)
DNA (201bp) protein (67aa)
4Fe-4S protein id=2001218 bin=GWD2_Bacteroidetes_40_43 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
4Fe-4S protein Tax=GWE2_Bacteroidetes_40_63_curated
4Fe-4S protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2813..3112)
DNA (300bp) protein (100aa)
Thioredoxin id=4961269 bin=GWC2_Bacteroidetes_40_13 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
trxA; thioredoxin; K03671 thioredoxin 1 Tax=GWE2_Bacteroidetes_40_63_curated
trxA; thioredoxin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3363..3770)
DNA (408bp) protein (136aa)
Putative uncharacterized protein id=2001220 bin=GWD2_Bacteroidetes_40_43 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3797..3937
DNA (141bp) protein (47aa)
Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3877..5106)
DNA (1230bp) protein (410aa)
Proteinase inhibitor I4 serpin id=2001221 bin=GWD2_Bacteroidetes_40_43 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
proteinase inhibitor I4 serpin Tax=GWE2_Bacteroidetes_40_63_curated
proteinase inhibitor I4 serpin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5266..22533)
DNA (17268bp) protein (5756aa)
hemagglutinin domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
Haemagluttinin repeat-containing protein id=2001222 bin=GWD2_Bacteroidetes_40_43 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hemagglutinin domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23153..23758)
DNA (606bp) protein (202aa)
halocyanin precursor-like protein id=2001223 bin=GWD2_Bacteroidetes_40_43 species=Halococcus hamelinensis genus=Halococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
halocyanin precursor-like protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24197..30868)
DNA (6672bp) protein (2224aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein AtheD1_00795 id=4074775 bin=GWF2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31245..32492)
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 id=2001227 bin=GWD2_Bacteroidetes_40_43 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
fucose permease Tax=GWE2_Bacteroidetes_40_63_curated
fucose permease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32539..34728)
DNA (2190bp) protein (730aa)
sodium:solute symporter family protein Tax=GWE2_Bacteroidetes_40_63_curated
Sodium:solute symporter family protein id=4074773 bin=GWF2_Bacteroidetes_40_13 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
sodium:solute symporter family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34766..36103)
DNA (1338bp) protein (446aa)
Endopolygalacturonase id=2001229 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
glycoside hydrolase Tax=GWE2_Bacteroidetes_40_63_curated
glycoside hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36112..37497)
DNA (1386bp) protein (462aa)
Putative LmbE-like protein id=2001230 bin=GWD2_Bacteroidetes_40_43 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
LmbE-like protein Tax=GWE2_Bacteroidetes_40_63_curated
N-acetylglucosaminylphosphatidylinositol deacetylase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37559..40672)
DNA (3114bp) protein (1038aa)
beta-galactosidase/beta-glucuronidase Tax=GWE2_Bacteroidetes_40_63_curated
Beta-galactosidase/beta-glucuronidase id=4074770 bin=GWF2_Bacteroidetes_40_13 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
beta-galactosidase/beta-glucuronidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40683..42365)
DNA (1683bp) protein (561aa)
glycoside hydrolase family 29 (alpha-L-fucosidase); K01206 alpha-L-fucosidase [EC:3.2.1.51] Tax=GWE2_Bacteroidetes_40_63_curated
Alpha-Fucosidase id=2001235 bin=GWD2_Bacteroidetes_40_43 species=Asticcacaulis biprosthecium genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
glycoside hydrolase family 29 (alpha-L-fucosidase)
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42413..44416)
DNA (2004bp) protein (668aa)
alpha-L-arabinofuranosidase domain protein Tax=GWE2_Bacteroidetes_40_63_curated
Alpha-L-arabinofuranosidase domain protein id=2001240 bin=GWD2_Bacteroidetes_40_43 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
alpha-L-arabinofuranosidase domain protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44530..46869)
DNA (2340bp) protein (780aa)
alpha-1,2-mannosidase Tax=GWE2_Bacteroidetes_40_63_curated
Alpha-1,2-mannosidase id=2001243 bin=GWD2_Bacteroidetes_40_43 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
alpha-1,2-mannosidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46881..48410)
DNA (1530bp) protein (510aa)
glycoside hydrolase family protein Tax=GWE2_Bacteroidetes_40_63_curated
Glycoside hydrolase family 28 id=4074760 bin=GWF2_Bacteroidetes_40_13 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
glycoside hydrolase family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48501..51266)
DNA (2766bp) protein (922aa)
glycoside hydrolase family protein Tax=GWE2_Bacteroidetes_40_63_curated
Glycoside hydrolase family 37 id=2001249 bin=GWD2_Bacteroidetes_40_43 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
glycoside hydrolase family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51282..52919)
DNA (1638bp) protein (546aa)
type I phosphodiesterase/nucleotide pyrophosphatase Tax=GWE2_Bacteroidetes_40_63_curated
Putative alkaline phosphatase, probable id=4074750 bin=GWF2_Bacteroidetes_40_13 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53128..54501)
DNA (1374bp) protein (458aa)
Endonuclease/exonuclease/phosphatase family / jacalin-like lectin domain multi-domain protein id=2001256 bin=GWD2_Bacteroidetes_40_43 species=Leptospira licerasiae genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54621..58010)
DNA (3390bp) protein (1130aa)
leucine-rich repeat-containing protein, partial id=2001259 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Os06g0585950; Protein kinase, catalytic domain domain containing protein. Tax=GWE2_Bacteroidetes_40_63_curated
RHS repeat-associated core domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58041..60629)
DNA (2589bp) protein (863aa)
Cell wall binding repeat 2 family protein Tax=GWE2_Bacteroidetes_40_63_curated
Cell wall binding repeat 2 family protein id=2001320 bin=GWD2_Bacteroidetes_40_43 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60641..61597)
DNA (957bp) protein (319aa)
id=2001321 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2001321 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61610..63430)
DNA (1821bp) protein (607aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Uncharacterized protein id=2001322 bin=GWD2_Bacteroidetes_40_43 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63441..66524)
DNA (3084bp) protein (1028aa)
TonB-dependent receptor plug id=4074737 bin=GWF2_Bacteroidetes_40_13 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
TonB-dependent receptor Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66668..66883
DNA (216bp) protein (72aa)
id=2001325 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2001325 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_396_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66816..69086)
DNA (2271bp) protein (757aa)
Alpha-1,2-mannosidase id=4074732 bin=GWF2_Bacteroidetes_40_13 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
alpha-1,2-mannosidase Tax=GWE2_Bacteroidetes_40_63_curated
alpha-mannosidase
Displaying items 1-30 of 45 in total

View Taxonomy