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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253

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Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..629
DNA (627bp) protein (209aa)
glycosyl hydrolase family protein id=1772052 bin=GWD2_Bacteroidetes_40_43 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
glycosidase Tax=GWE2_Bacteroidetes_40_63_curated
glycosidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(637..1173)
DNA (537bp) protein (179aa)
AmzA: archaemetzincin (Peptidase, M54 family) id=1772053 bin=GWD2_Bacteroidetes_40_43 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
amzA; archaemetzincin AmzA Tax=GWE2_Bacteroidetes_40_63_curated
Zn-dependent protease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1249..2586)
DNA (1338bp) protein (446aa)
Response regulator id=4310896 bin=GWF2_Bacteroidetes_40_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Response regulator Tax=GWE2_Bacteroidetes_40_63_curated
Fis family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2598..4229)
DNA (1632bp) protein (544aa)
NtrC family signal transduction histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
NtrC family signal transduction histidine kinase id=1772055 bin=GWD2_Bacteroidetes_40_43 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4472..5188)
DNA (717bp) protein (239aa)
Response regulator receiver protein id=1772056 bin=GWD2_Bacteroidetes_40_43 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5231..6457)
DNA (1227bp) protein (409aa)
Protein DVU_0534 id=1772057 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
polysulfide reductase NrfD Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6450..7313)
DNA (864bp) protein (288aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1772058 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
4Fe-4S ferredoxin Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7526..9214)
DNA (1689bp) protein (563aa)
phosphate ABC transporter substrate-binding protein, phot family; K02040 phosphate transport system substrate-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
Phosphate ABC transporter substrate-binding protein, PhoT family id=1772074 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9853..9975)
DNA (123bp) protein (41aa)
id=1772079 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1772079 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10004..10276
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein id=1772080 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=GWE2_Bacteroidetes_40_63_curated
histone family protein DNA-binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10336..11034
DNA (699bp) protein (233aa)
tRNA/rRNA methyltransferase SpoU; K00556 tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] Tax=GWE2_Bacteroidetes_40_63_curated
tRNA/rRNA methyltransferase (SpoU) id=1772084 bin=GWD2_Bacteroidetes_40_43 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
rRNA methyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11024..13762)
DNA (2739bp) protein (913aa)
Subtilisin-like serine protease Tax=GWE2_Bacteroidetes_40_63_curated
Subtilisin-like serine protease id=1772088 bin=GWD2_Bacteroidetes_40_43 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
subtilisin-like serine protease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14288..14620)
DNA (333bp) protein (111aa)
id=1772092 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1772092 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14713..16131)
DNA (1419bp) protein (473aa)
histidine kinase id=1772094 bin=GWD2_Bacteroidetes_40_43 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
sensor protein Tax=GWE2_Bacteroidetes_40_63_curated
sensor protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16307..17563
DNA (1257bp) protein (419aa)
two-component regulatory system, sensor kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=GWE2_Bacteroidetes_40_63_curated
Sensor protein RprX id=1772098 bin=GWD2_Bacteroidetes_40_43 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17665..18366
DNA (702bp) protein (234aa)
RprY id=1772102 bin=GWD2_Bacteroidetes_40_43 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
winged helix family two component transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18360..19286)
DNA (927bp) protein (309aa)
Leucine-rich repeat protein id=1772106 bin=GWD2_Bacteroidetes_40_43 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
internalin, putative Tax=GWE2_Bacteroidetes_40_63_curated
internalin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19763..22210
DNA (2448bp) protein (816aa)
homoserine dehydrogenase/aspartate kinase Tax=GWE2_Bacteroidetes_40_63_curated
Bifunctional protein: aspartokinase I; homoserine dehydrogenase id=1772110 bin=GWD2_Bacteroidetes_40_43 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
homoserine dehydrogenase/aspartate kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22221..23168
DNA (948bp) protein (316aa)
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] Tax=GWE2_Bacteroidetes_40_63_curated
Homoserine kinase id=1772114 bin=GWD2_Bacteroidetes_40_43 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
homoserine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23286..24581
DNA (1296bp) protein (432aa)
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=GWE2_Bacteroidetes_40_63_curated
Threonine synthase id=4310927 bin=GWF2_Bacteroidetes_40_13 species=Prevotella salivae genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
threonine synthase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24528..24779)
DNA (252bp) protein (84aa)
Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24906..25670
DNA (765bp) protein (255aa)
Cobyrinic acid ac-diamide synthase id=1772123 bin=GWD2_Bacteroidetes_40_43 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Cobyrinic acid ac-diamide synthase Tax=GWE2_Bacteroidetes_40_63_curated
Cobyrinic acid ac-diamide synthase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25654..25929
DNA (276bp) protein (92aa)
id=1772127 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1772127 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25934..26452
DNA (519bp) protein (173aa)
Putative uncharacterized protein id=1772128 bin=GWD2_Bacteroidetes_40_43 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26558..28603)
DNA (2046bp) protein (682aa)
heat shock protein hsp90; K04079 molecular chaperone HtpG Tax=GWE2_Bacteroidetes_40_63_curated
heat shock protein 90 id=1772133 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
molecular chaperone Hsp90
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28877..29410)
DNA (534bp) protein (178aa)
id=1772136 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1772136 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29679..30596)
DNA (918bp) protein (306aa)
hypothetical protein MsalJ2_14566 id=1772137 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30596..31801)
DNA (1206bp) protein (402aa)
Ornithine/acetylornithine aminotransferase id=1772140 bin=GWD2_Bacteroidetes_40_43 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ornithine/acetylornithine aminotransferase Tax=GWE2_Bacteroidetes_40_63_curated
ornithine/acetylornithine aminotransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31809..32519)
DNA (711bp) protein (237aa)
two component transcriptional regulator, lyttr family protein id=1772144 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
response regulator of the LytR/AlgR family Tax=GWE2_Bacteroidetes_40_63_curated
response regulator of the LytR/AlgR family
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_253_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32743..33357
DNA (615bp) protein (205aa)
Transcriptional regulator, Crp/Fnr family id=4223333 bin=GWC2_Bacteroidetes_40_13 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Crp/Fnr family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein Tax=GWE2_Bacteroidetes_40_63_curated
Crp/Fnr family transcriptional regulator
Displaying items 1-30 of 100 in total

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