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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_1
RIFOXYC1_FULL_Bdellovibrionales_39_130_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(1..735)
DNA (735bp) protein (245aa)
Putative peptidase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X4S9_BACMS
hypothetical protein; K06978 Tax=RIFOXYC1_FULL_Bdellovibrionales_39_130_curated
putative peptidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

966..2165
DNA (1200bp) protein (400aa)
Histidine kinase id=1894772 bin=GWD2_Bacteroidetes_40_43 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2382..4826
DNA (2445bp) protein (815aa)
TonB-dependent receptor Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor plug id=1894778 bin=GWD2_Bacteroidetes_40_43 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
TonB-dependent receptor
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6187..8352
DNA (2166bp) protein (722aa)
Beta-Ig-H3/fasciclin Tax=GWE2_Bacteroidetes_40_63_curated
Beta-Ig-H3/fasciclin id=1894783 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8396..11647
DNA (3252bp) protein (1084aa)
SusC/RagA family TonB-linked outer membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor plug id=1894788 bin=GWD2_Bacteroidetes_40_43 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
SusC/RagA family TonB-linked outer membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11672..13099
DNA (1428bp) protein (476aa)
RagB/SusD domain-containing protein id=1894792 bin=GWD2_Bacteroidetes_40_43 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RagB/SusD family protein Tax=GWE2_Bacteroidetes_40_63_curated
membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13107..14648
DNA (1542bp) protein (514aa)
beta-Ig-H3/fasciclin Tax=GWE2_Bacteroidetes_40_63_curated
Beta-Ig-H3/fasciclin id=1894824 bin=GWD2_Bacteroidetes_40_43 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
beta-Ig-H3/fasciclin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14678..17824
DNA (3147bp) protein (1049aa)
TonB-dependent receptor Tax=GWE2_Bacteroidetes_40_63_curated
TonB-linked outer membrane protein, SusC/RagA family id=2717601 bin=GWF2_Bacteroidetes_40_13 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
TonB-dependent receptor
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17836..19326
DNA (1491bp) protein (497aa)
Putative uncharacterized protein id=1894828 bin=GWD2_Bacteroidetes_40_43 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19555..20625
DNA (1071bp) protein (357aa)
Signal transduction ATPase, FimS family id=1894829 bin=GWD2_Bacteroidetes_40_43 species=Idiomarina loihiensis genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
signal transduction ATPase Tax=GWE2_Bacteroidetes_40_63_curated
signal transduction ATPase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20618..21346
DNA (729bp) protein (243aa)
Two component transcriptional regulator, LytTR family id=1894830 bin=GWD2_Bacteroidetes_40_43 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
LytTR family two component transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
LytTR family two component transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21413..22348)
DNA (936bp) protein (312aa)
id=1894831 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1894831 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22368..24725)
DNA (2358bp) protein (786aa)
tonb-dependent receptor plug Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor plug id=2717388 bin=GWF2_Bacteroidetes_40_13 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
tonb-dependent receptor plug
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25063..26688)
DNA (1626bp) protein (542aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Tetratricopeptide repeat domain protein id=1894833 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26943..27428
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=1894836 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27432..28208
DNA (777bp) protein (259aa)
Beta-lactamase type II id=2717369 bin=GWF2_Bacteroidetes_40_13 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Zn-dependent hydrolase Tax=GWE2_Bacteroidetes_40_63_curated
Zn-dependent hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28219..29040
DNA (822bp) protein (274aa)
Aminotransferase class IV id=1894841 bin=GWD2_Bacteroidetes_40_43 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
aminotransferase class IV Tax=GWE2_Bacteroidetes_40_63_curated
aminotransferase class IV
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29115..31607)
DNA (2493bp) protein (831aa)
peptidase M28 Tax=GWE2_Bacteroidetes_40_63_curated
Putative bacterial leucyl aminopeptidase (Lap module); putative fibronectin type III domain id=1894843 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
peptidase M28
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31676..33403)
DNA (1728bp) protein (576aa)
endonuclease/exonuclease/phosphatase family protein Tax=GWE2_Bacteroidetes_40_63_curated
Endonuclease/exonuclease/phosphatase family protein id=2717356 bin=GWF2_Bacteroidetes_40_13 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
endonuclease/exonuclease/phosphatase family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33589..34239
DNA (651bp) protein (217aa)
Putative NADH dehydrogenase with NAD(P)-binding domain id=1894847 bin=GWD2_Bacteroidetes_40_43 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
semialdehyde dehydrogenase nad - binding protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34300..36090)
DNA (1791bp) protein (597aa)
NAD(P)-dependent iron-only hydrogenase catalytic subunit; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=GWE2_Bacteroidetes_40_63_curated
NAD(P)-dependent iron-only hydrogenase catalytic subunit id=1852318 bin=GWE2_Bacteroidetes_40_63 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
ferredoxin
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36124..37305)
DNA (1182bp) protein (394aa)
Fe-only hydrogenase, fused subunits beta and gamma id=4806302 bin=GWC2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Fe-only hydrogenase, fused subunits beta and gamma Tax=GWE2_Bacteroidetes_40_63_curated
dehydrogenase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37360..37833)
DNA (474bp) protein (158aa)
Fe-only hydrogenase, fused subunits beta and gamma id=4806331 bin=GWC2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Fe-only hydrogenase, fused subunits beta and gamma Tax=GWE2_Bacteroidetes_40_63_curated
NADH dehydrogenase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38235..40454)
DNA (2220bp) protein (740aa)
Peptidase S46 Tax=GWE2_Bacteroidetes_40_63_curated
Peptidase S46 id=1894855 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Peptidase S46
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40466..41050)
DNA (585bp) protein (195aa)
Maf-like protein BACEGG_01909 id=2717343 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
maf protein; K06287 septum formation protein Tax=GWE2_Bacteroidetes_40_63_curated
septum formation inhibitor Maf
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41052..42029)
DNA (978bp) protein (326aa)
ubia prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWE2_Bacteroidetes_40_63_curated
prenyltransferase id=2717342 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ubia prenyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42033..42566)
DNA (534bp) protein (178aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=GWE2_Bacteroidetes_40_63_c
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase id=1894861 bin=GWD2_Bacteroidetes_40_43 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42574..43362)
DNA (789bp) protein (263aa)
hypothetical protein AtheD1_06636 id=1894863 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
NADP oxidoreductase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43445..44017)
DNA (573bp) protein (191aa)
Electron transport complex, RnfABCDGE type, A subunit id=2717336 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
electron transport complex, RnfABCDGE type, A subunit; K03617 electron transport complex protein RnfA Tax=GWE2_Bacteroidetes_40_63_curated
electron transport complex, RnfABCDGE type, A subunit
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_296_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44033..44614)
DNA (582bp) protein (194aa)
electron transport complex RsxE subunit id=4704011 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
electron transporter RsxE Tax=GWE2_Bacteroidetes_40_63_curated
Electron transport complex protein RnfE
Displaying items 1-30 of 39 in total

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