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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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2..223
DNA (222bp) protein (74aa)
Putative uncharacterized protein id=1741988 bin=GWD2_Bacteroidetes_40_43 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
two component transcriptional regulator, winged helix family; K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=GWE2_Bacteroidetes_40_63_curated
winged helix family two component transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

362..475
DNA (114bp) protein (38aa)
id=1741987 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1741987 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

472..717
DNA (246bp) protein (82aa)
transcriptional regulator, xre family protein id=4373586 bin=GWF2_Bacteroidetes_40_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
transcription regulator containing HTH domain Tax=GWE2_Bacteroidetes_40_63_curated
transcription regulator containing HTH domain
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1081..1428
DNA (348bp) protein (116aa)
hypothetical protein Lnog2_03080 id=1741980 bin=GWD2_Bacteroidetes_40_43 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1549..2364)
DNA (816bp) protein (272aa)
Glycoside hydrolase family 16, candidate beta-glycosidase id=1741977 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
beta-glycosidase Tax=GWE2_Bacteroidetes_40_63_curated
beta-glycosidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2437..3795)
DNA (1359bp) protein (453aa)
Putative ribonuclease BN id=1741974 bin=GWD2_Bacteroidetes_40_43 species=Psychromonas ingrahamii genus=Psychromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
putative ribonuclease BN; K07058 membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
putative ribonuclease BN
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4308..5123
DNA (816bp) protein (272aa)
zinc/iron permease id=1741971 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
zinc/iron permease; K07238 zinc transporter, ZIP family Tax=GWE2_Bacteroidetes_40_63_curated
dihydroorotate dehydrogenase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5441..5983)
DNA (543bp) protein (181aa)
hypothetical protein; K01673 carbonic anhydrase [EC:4.2.1.1] Tax=GWE2_Bacteroidetes_40_63_curated
Carbonic anhydrase id=1741967 bin=GWD2_Bacteroidetes_40_43 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6219..6773
DNA (555bp) protein (185aa)
hypothetical protein GCBA3_14710 id=1741963 bin=GWD2_Bacteroidetes_40_43 species=Gillisia marina genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein GCBA3_14710 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6776..7435
DNA (660bp) protein (220aa)
id=1741962 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1741962 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7790..9184
DNA (1395bp) protein (465aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1741953 bin=GWD2_Bacteroidetes_40_43 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9228..11090
DNA (1863bp) protein (621aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=4373605 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11304..12269
DNA (966bp) protein (322aa)
id=1741951 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1741951 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12750..12905)
DNA (156bp) protein (52aa)
id=1741950 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1741950 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13084..14334
DNA (1251bp) protein (417aa)
Ammonium transporter id=4373610 bin=GWF2_Bacteroidetes_40_13 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ammonium transporter Tax=GWE2_Bacteroidetes_40_63_curated
ammonium transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14448..15842
DNA (1395bp) protein (465aa)
Sensor histidine protein kinase id=1741948 bin=GWD2_Bacteroidetes_40_43 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
integral membrane sensor signal transduction histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15829..16491
DNA (663bp) protein (221aa)
Two component transcriptional regulator, LuxR family id=4373614 bin=GWF2_Bacteroidetes_40_13 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
LuxR family transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
LuxR family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16741..17946
DNA (1206bp) protein (402aa)
Putative uncharacterized protein id=1741945 bin=GWD2_Bacteroidetes_40_43 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18089..19009)
DNA (921bp) protein (307aa)
Mevalonate kinase id=1862161 bin=GWE2_Bacteroidetes_40_63 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
mevalonate kinase Tax=GWE2_Bacteroidetes_40_63_curated
mevalonate kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_20
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19236..20261)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003725292
hypothetical protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_1387_21
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(20227..20448)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAP3_9FIRM
Uncharacterized protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
Displaying 21 items

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