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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..86
DNA (84bp) protein (28aa)
id=1980612 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

153..1172
DNA (1020bp) protein (340aa)
id=1980612 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1206..1661
DNA (456bp) protein (152aa)
id=1980613 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1980613 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1600..2220
DNA (621bp) protein (207aa)
Uncharacterized protein id=1980615 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2653..4680
DNA (2028bp) protein (676aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1980616 bin=GWD2_Bacteroidetes_40_43 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4824..5366)
DNA (543bp) protein (181aa)
Biotin/lipoyl attachment domain-containing protein id=1980618 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
biotin/lipoyl attachment domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
biotin/lipoyl attachment domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5416..6921)
DNA (1506bp) protein (502aa)
Pyruvate carboxylase (EC:6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=GWE2_Bacteroidetes_40_63_curated
Pyruvate carboxylase (EC:6.4.1.1)
Putative uncharacterized protein id=1980620 bin=GWD2_Bacteroidetes_40_43 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6954..8510)
DNA (1557bp) protein (519aa)
propionyl-CoA carboxylase (EC:6.4.1.3) Tax=GWE2_Bacteroidetes_40_63_curated
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase id=4327078 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9445..10434
DNA (990bp) protein (330aa)
id=1980627 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1980627 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10485..12089)
DNA (1605bp) protein (535aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=GWE2_Bacteroidetes_40_63_curated
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type id=4327083 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
fumarate hydratase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12237..13610
DNA (1374bp) protein (458aa)
protein serine/threonine phosphatase Tax=GWE2_Bacteroidetes_40_63_curated
Protein serine/threonine phosphatase id=4082119 bin=GWC2_Bacteroidetes_40_13 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Ser/Thr phosphatase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13886..17314
DNA (3429bp) protein (1143aa)
multi-sensor signal transduction histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
Multi-sensor signal transduction histidine kinase id=1980634 bin=GWD2_Bacteroidetes_40_43 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
multi-sensor signal transduction histidine kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17334..17513)
DNA (180bp) protein (60aa)
id=1980637 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1980637 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17553..18596)
DNA (1044bp) protein (348aa)
Signal peptidase I id=1980638 bin=GWD2_Bacteroidetes_40_43 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
signal peptidase I Tax=GWE2_Bacteroidetes_40_63_curated
signal peptidase I
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18654..19985)
DNA (1332bp) protein (444aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=GWE2_Bacteroidetes_40_63_curated
Signal peptidase I id=4327092 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
signal peptidase I
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20120..20842)
DNA (723bp) protein (241aa)
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=GWE2_Bacteroidetes_40_63_curated
Dihydrodipicolinate reductase id=1980644 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
dihydrodipicolinate reductase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20874..21056)
DNA (183bp) protein (61aa)
oligoendopeptidase F (EC:3.4.24.-) Tax=GWE2_Bacteroidetes_40_63_curated
oligoendopeptidase F (EC:3.4.24.-)
Transcriptional regulator, XRE family id=4082128 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21156..21947)
DNA (792bp) protein (264aa)
Kef-type K+ ransport system, predicted NAD-binding component id=1980650 bin=GWD2_Bacteroidetes_40_43 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Kef-type K+ ransport system NAD-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
Kef-type K+ ransport system NAD-binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21982..22662)
DNA (681bp) protein (227aa)
id=1980653 Tax=GWE2_Bacteroidetes_40_63_curated
id=1980653 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22736..24316)
DNA (1581bp) protein (527aa)
id=1980654 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1980654 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(24478..24822)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 id=4327134 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=GWE2_Bacteroidetes_40_63_curated
LSU ribosomal protein L20p
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(24907..25092)
DNA (186bp) protein (62aa)
50S ribosomal protein L35 id=4082133 bin=GWC2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=GWE2_Bacteroidetes_40_63_curated
50S ribosomal protein L35
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25126..25587)
DNA (462bp) protein (154aa)
Translation initiation factor IF-3 id=2342481 bin=GWA2_Bacteroidetes_40_14 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=GWE2_Bacteroidetes_40_63_curated
translation initiation factor IF-3
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25710..27650)
DNA (1941bp) protein (647aa)
threonyl-tRNA synthetase Tax=GWE2_Bacteroidetes_40_63_curated
threonyl-tRNA ligase id=4327137 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
threonyl-tRNA synthetase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27862..28143)
DNA (282bp) protein (94aa)
hypothetical protein AnHS1_10412 id=1980710 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein AnHS1_10412 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28195..29241)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein id=1980711 bin=GWD2_Bacteroidetes_40_43 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29505..31505)
DNA (2001bp) protein (667aa)
amino/aminoacylpeptidase, esterase/lipase superfamily Tax=GWE2_Bacteroidetes_40_63_curated
Amino/aminoacylpeptidase, esterase/lipase superfamily id=1980712 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
amino/aminoacylpeptidase, esterase/lipase superfamily
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31662..32225
DNA (564bp) protein (188aa)
RNA polymerase sigma-70 factor, ECF subfamily id=4327141 bin=GWF2_Bacteroidetes_40_13 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ECF subfamily RNA polymerase sigma-24 factor Tax=GWE2_Bacteroidetes_40_63_curated
ECF subfamily RNA polymerase sigma-24 factor
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32240..33211
DNA (972bp) protein (324aa)
anti-sigma factor id=1980714 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
anti-FecI sigma factor FecR Tax=GWE2_Bacteroidetes_40_63_curated
anti-FecI sigma factor FecR
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_403_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33310..35856
DNA (2547bp) protein (849aa)
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_40_63_curated
Putative outer membrane protein probably involved in nutrient binding id=1980715 bin=GWD2_Bacteroidetes_40_43 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
TonB-dependent receptor plug
Displaying items 1-30 of 31 in total

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