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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1049)
DNA (1047bp) protein (349aa)
Methyl-accepting chemotaxis protein id=1796444 bin=GWD2_Bacteroidetes_40_43 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
methyl-accepting chemotaxis protein Tax=GWE2_Bacteroidetes_40_63_curated
methyl-accepting chemotaxis protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1079..1684)
DNA (606bp) protein (202aa)
CheW-like protein id=1796443 bin=GWD2_Bacteroidetes_40_43 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
CheW-like protein Tax=GWE2_Bacteroidetes_40_63_curated
CheW-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1702..3198)
DNA (1497bp) protein (499aa)
CheR-type MCP methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=GWE2_Bacteroidetes_40_63_curated
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type id=1796442 bin=GWD2_Bacteroidetes_40_43 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3202..3675)
DNA (474bp) protein (158aa)
cheW2; chemotaxis protein CheW CheW2 Tax=GWE2_Bacteroidetes_40_63_curated
CheW2: chemotaxis protein CheW id=1796441 bin=GWD2_Bacteroidetes_40_43 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
cheW2; chemotaxis protein CheW CheW2
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4031..4303)
DNA (273bp) protein (91aa)
Uncharacterized protein family (UPF0104) id=1796440 bin=GWD2_Bacteroidetes_40_43 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


5157..5942
DNA (786bp) protein (262aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=GWE2_Bacteroidetes_40_63_curated
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A id=1796439 bin=GWD2_Bacteroidetes_40_43 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5957..7318
DNA (1362bp) protein (454aa)
Ribosomal RNA small subunit methyltransferase A id=4473378 bin=GWA2_Bacteroidetes_40_14 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
Mg2+ transporter MgtE; K06213 magnesium transporter Tax=GWE2_Bacteroidetes_40_63_curated
Mg2+ transporter MgtE
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7344..7832
DNA (489bp) protein (163aa)
id=1796436 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1796436 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7982..9340)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein id=4445520 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein; K09808 lipoprotein-releasing system permease protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9407..10057
DNA (651bp) protein (217aa)
protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=GWE2_Bacteroidetes_40_63_curated
Protein-L-isoaspartate O-methyltransferase id=4445517 bin=GWF2_Bacteroidetes_40_13 species=Croceibacter atlanticus genus=Croceibacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
protein-L-isoaspartate O-methyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10208..11719
DNA (1512bp) protein (504aa)
glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=GWE2_Bacteroidetes_40_63_curated
glutamate--ammonia ligase (EC:6.3.1.2)
L-glutamine synthetase id=4445514 bin=GWF2_Bacteroidetes_40_13 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11957..14125)
DNA (2169bp) protein (723aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=GWE2_Bacteroidetes_40_63_curated
ATP-dependent DNA helicase id=1796427 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
recQ1; putative ATP-dependent DNA helicase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14424..15392
DNA (969bp) protein (323aa)
KpsF/GutQ family protein (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=GWE2_Bacteroidetes_40_63_curated
Sugar phosphate isomerase, KpsF/GutQ family protein id=4365717 bin=GWC2_Bacteroidetes_40_13 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
arabinose 5-phosphate isomerase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15527..16426
DNA (900bp) protein (300aa)
oxidoreductase
Oxidoreductase domain protein id=1796420 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Oxidoreductase domain protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16499..17329
DNA (831bp) protein (277aa)
Putative uncharacterized protein id=1796418 bin=GWD2_Bacteroidetes_40_43 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17338..18762
DNA (1425bp) protein (475aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase id=1796416 bin=GWD2_Bacteroidetes_40_43 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tax=GWE2_Bacteroidetes_40_63_curated
glycosyl transferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18862..20166
DNA (1305bp) protein (435aa)
Putative uncharacterized protein id=4473368 bin=GWA2_Bacteroidetes_40_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
4-hydroxybutyrate CoA transferase Tax=GWE2_Bacteroidetes_40_63_curated
4-hydroxybutyrate CoA transferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20428..20955
DNA (528bp) protein (176aa)
id=1796400 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1796400 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21015..22355)
DNA (1341bp) protein (447aa)
glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=GWE2_Bacteroidetes_40_63_curated
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase id=4445491 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22392..23387)
DNA (996bp) protein (332aa)
glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWE2_Bacteroidetes_40_63_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=4365659 bin=GWC2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
glycerol-3-phosphate dehydrogenase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23517..24323)
DNA (807bp) protein (269aa)
id=1796397 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1796397 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24328..25095)
DNA (768bp) protein (256aa)
Putative uncharacterized protein id=1796396 bin=GWD2_Bacteroidetes_40_43 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25436..26554)
DNA (1119bp) protein (373aa)
ABC-2 type transporter id=1796394 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ybhR; ABC transporter permease; K09686 antibiotic transport system permease protein Tax=GWE2_Bacteroidetes_40_63_curated
ABC transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26568..27674)
DNA (1107bp) protein (369aa)
ABC-2 type transporter id=4445477 bin=GWF2_Bacteroidetes_40_13 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ABC transporter; K09686 antibiotic transport system permease protein Tax=GWE2_Bacteroidetes_40_63_curated
multidrug ABC transporter permease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27782..28069)
DNA (288bp) protein (96aa)
hypothetical protein FbacS_13080 id=4445474 bin=GWF2_Bacteroidetes_40_13 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28080..28847)
DNA (768bp) protein (256aa)
Electron transfer flavoprotein id=4365648 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
ABC transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29016..29945)
DNA (930bp) protein (310aa)
ABC transporter related protein id=1796383 bin=GWD2_Bacteroidetes_40_43 species=Formosa sp. AK20 genus=Formosa taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ybhF2; ABC transporter ATPase Tax=GWE2_Bacteroidetes_40_63_curated
ATPase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29955..30839)
DNA (885bp) protein (295aa)
putative ABC transport system, lipoprotein id=1796379 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ybhG; membrane fusion protein; K01993 HlyD family secretion protein Tax=GWE2_Bacteroidetes_40_63_curated
ABC transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30888..32246)
DNA (1359bp) protein (453aa)
Outer membrane efflux protein id=1796375 bin=GWD2_Bacteroidetes_40_43 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
outer membrane efflux protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_319_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32248..32874)
DNA (627bp) protein (209aa)
TetR-type transcriptional regulator id=1796372 bin=GWD2_Bacteroidetes_40_43 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
TetR family transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
TetR family transcriptional regulator
Displaying items 1-30 of 57 in total

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