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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

133..324
DNA (192bp) protein (64aa)
id=1949840 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1949840 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

870..2054
DNA (1185bp) protein (395aa)
Putative uncharacterized protein id=1949843 bin=GWD2_Bacteroidetes_40_43 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
von Willebrand factor type A-like protein Tax=GWE2_Bacteroidetes_40_63_curated
von Willebrand factor type A-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2497..3003
DNA (507bp) protein (169aa)
id=1949845 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1949845 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3497..6742
DNA (3246bp) protein (1082aa)
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_40_63_curated
Outer membrane protein id=4433715 bin=GWF2_Bacteroidetes_40_13 species=Prevotella bryantii genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6765..8606
DNA (1842bp) protein (614aa)
RagB/SusD domain protein id=4433645 bin=GWF2_Bacteroidetes_40_13 species=Prevotella bryantii genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RagB/SusD domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
glycan metabolism protein RagB
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8633..9145
DNA (513bp) protein (171aa)
id=1949850 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1949850 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9235..10356
DNA (1122bp) protein (374aa)
Cna B domain protein id=1949851 bin=GWD2_Bacteroidetes_40_43 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Cna B domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
Cna B domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10443..13346
DNA (2904bp) protein (968aa)
Pectate lyase id=4433640 bin=GWF2_Bacteroidetes_40_13 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
pectate lyase Tax=GWE2_Bacteroidetes_40_63_curated
pectate lyase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13352..14890
DNA (1539bp) protein (513aa)
glycosyl hydrolase family 88 Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1923778 bin=GWE2_Bacteroidetes_40_63 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
glycosyl hydrolase family 88
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14939..16360
DNA (1422bp) protein (474aa)
polygalacturonase (EC:3.2.1.15) Tax=GWE2_Bacteroidetes_40_63_curated
Polygalacturonase id=4433636 bin=GWF2_Bacteroidetes_40_13 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
glycoside hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16414..17145
DNA (732bp) protein (244aa)
polygalacturonase Tax=GWE2_Bacteroidetes_40_63_curated
GntR family transcriptional regulator id=4874458 bin=GWA2_Bacteroidetes_40_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
rhamnogalacturonan acetylesterase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17142..18755
DNA (1614bp) protein (538aa)
xylan 1,4-beta-xylosidase Tax=GWE2_Bacteroidetes_40_63_curated
Xylan 1,4-beta-xylosidase id=1949861 bin=GWD2_Bacteroidetes_40_43 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
xylan 1,4-beta-xylosidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18762..20036
DNA (1275bp) protein (425aa)
Uncharacterized protein id=1949879 bin=GWD2_Bacteroidetes_40_43 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
rhamnogalacturonyl hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20048..21310
DNA (1263bp) protein (421aa)
Pectinesterase id=4433628 bin=GWF2_Bacteroidetes_40_13 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
pectinesterase Tax=GWE2_Bacteroidetes_40_63_curated
pectinesterase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21323..23740
DNA (2418bp) protein (806aa)
Pectinesterase id=1949883 bin=GWD2_Bacteroidetes_40_43 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Pectinesterase Tax=GWE2_Bacteroidetes_40_63_curated
Pectinesterase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23984..24406)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=1949885 bin=GWD2_Bacteroidetes_40_43 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24598..26292)
DNA (1695bp) protein (565aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=4433622 bin=GWF2_Bacteroidetes_40_13 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26283..26516)
DNA (234bp) protein (78aa)
Putative uncharacterized protein id=1949891 bin=GWD2_Bacteroidetes_40_43 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26503..27312)
DNA (810bp) protein (270aa)
Putative uncharacterized protein id=1949894 bin=GWD2_Bacteroidetes_40_43 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27608..31657)
DNA (4050bp) protein (1350aa)
Histidine kinase-like ATPase id=1949899 bin=GWD2_Bacteroidetes_40_43 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Histidine kinase-like ATPase Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31724..32968)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein id=1949902 bin=GWD2_Bacteroidetes_40_43 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33087..33770)
DNA (684bp) protein (228aa)
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] Tax=GWE2_Bacteroidetes
MS105, putative gluconate aldolase id=1923812 bin=GWE2_Bacteroidetes_40_63 species=Microscilla sp. PRE1 genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33859..35049)
DNA (1191bp) protein (397aa)
Glycosyl hydrolase family 88 id=4433611 bin=GWF2_Bacteroidetes_40_13 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
glycoside hydrolase Tax=GWE2_Bacteroidetes_40_63_curated
glucuronyl hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35132..36166)
DNA (1035bp) protein (345aa)
pfkb domain protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=4958061 bin=GWC2_Bacteroidetes_40_13 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
pfkb domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36263..37660)
DNA (1398bp) protein (466aa)
glucuronate isomerase (EC:5.3.1.12); K01812 glucuronate isomerase [EC:5.3.1.12] Tax=GWE2_Bacteroidetes_40_63_curated
glucuronate isomerase (EC:5.3.1.12)
glucuronate isomerase id=1923824 bin=GWE2_Bacteroidetes_40_63 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37734..38537)
DNA (804bp) protein (268aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
gluconate 5-dehydrogenase id=4433605 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
gluconate 5-dehydrogenase Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38602..39447)
DNA (846bp) protein (282aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17); K01815 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] Tax=GWE2_Bacteroidetes_40_63_curated
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase id=1949915 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39459..40913)
DNA (1455bp) protein (485aa)
Major facilitator superfamily MFS_1 id=4433601 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
major facilitator transporter; K08191 MFS transporter, ACS family, hexuronate transporter Tax=GWE2_Bacteroidetes_40_63_curated
major facilitator transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40942..42396)
DNA (1455bp) protein (485aa)
gnd; Gnd (EC:1.1.1.44) Tax=GWE2_Bacteroidetes_40_63_curated
gnd; Gnd (EC:1.1.1.44)
6-phosphogluconate dehydrogenase id=4433599 bin=GWF2_Bacteroidetes_40_13 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_310_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42447..42806)
DNA (360bp) protein (120aa)
S23 ribosomal protein id=1949921 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
S23 ribosomal protein Tax=GWE2_Bacteroidetes_40_63_curated
S23 ribosomal protein
Displaying items 1-30 of 48 in total

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