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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_31
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38503..39495)
DNA (993bp) protein (331aa)
Ribonuclease BN id=2007785 bin=GWD2_Bacteroidetes_40_43 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ribonuclease BN; K07058 membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
ribonuclease BN
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_32
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39500..40348)
DNA (849bp) protein (283aa)
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=GWE2_Bacteroidetes_40_63_curated
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) id=2007786 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_33
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40348..40770)
DNA (423bp) protein (141aa)
id=2007787 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2007787 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_34
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40866..41339
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H id=3665075 bin=GWC2_Bacteroidetes_40_13 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_35
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41347..45015
DNA (3669bp) protein (1223aa)
integral membrane sensor signal transduction histidine kinase id=4638015 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
integral membrane sensor signal transduction histidine kinase Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_36
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45361..46053)
DNA (693bp) protein (231aa)
DNA repair protein RadC id=2007794 bin=GWD2_Bacteroidetes_40_43 species=Gramella forsetii genus=Gramella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_37
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(46169..46420)
DNA (252bp) protein (84aa)
30S ribosomal protein S20 id=2007796 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=GWE2_Bacteroidetes_40_63_curated
rpsT; 30S ribosomal protein S20
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_38
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46832..47101
DNA (270bp) protein (90aa)
id=2007798 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2007798 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_39
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

47176..49041
DNA (1866bp) protein (622aa)
DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL Tax=GWE2_Bacteroidetes_40_63_curated
DNA mismatch repair protein mutL id=4638019 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
DNA mismatch repair protein MutL
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_40
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49054..49884
DNA (831bp) protein (277aa)
Putative uncharacterized protein id=2007804 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Rhomboid family protein Tax=GWE2_Bacteroidetes_40_63_curated
Rhomboid family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_41
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49971..50861
DNA (891bp) protein (297aa)
Putative membrane protein id=4638021 bin=GWF2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_42
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51061..52914
DNA (1854bp) protein (618aa)
3-oxoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=GWE2_Bacteroidetes_40_63_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=2007815 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
3-oxoacyl-ACP synthase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_43
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

53327..53968
DNA (642bp) protein (214aa)
Caffeoyl-CoA O-methyltransferase (EC:2.1.1.104) Tax=GWE2_Bacteroidetes_40_63_curated
Caffeoyl-CoA O-methyltransferase id=4638023 bin=GWF2_Bacteroidetes_40_13 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
caffeoyl-CoA O-methyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_44
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54053..54859
DNA (807bp) protein (269aa)
Putative uncharacterized protein id=2007822 bin=GWD2_Bacteroidetes_40_43 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
short-chain dehydrogenase Tax=GWE2_Bacteroidetes_40_63_curated
short-chain dehydrogenase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_45
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

54860..55807
DNA (948bp) protein (316aa)
tRNA-u20a,u20b-dihydrouridine synthase id=4638025 bin=GWF2_Bacteroidetes_40_13 species=Gillisia marina genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
tRNA-dihydrouridine synthase Tax=GWE2_Bacteroidetes_40_63_curated
dihydrouridine synthase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_46
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55923..56129
DNA (207bp) protein (69aa)
id=2007828 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2007828 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_47
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56345..56536)
DNA (192bp) protein (64aa)
Cold shock protein id=2106702 bin=GWE2_Bacteroidetes_40_63 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
cold-shock protein Tax=GWE2_Bacteroidetes_40_63_curated
cold-shock protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_48
unknown

Not on your lists

comp(56544..56750)
DNA (207bp) protein (69aa)

This feature has no annotations

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_49
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56808..56996)
DNA (189bp) protein (63aa)
id=2007832 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2007832 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_50
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

57333..57818
DNA (486bp) protein (162aa)
id=2007833 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2007833 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_51
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57830..58654)
DNA (825bp) protein (275aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=GWE2_Bacteroidetes_40_63_curated
Orotidine 5'-phosphate decarboxylase id=2007834 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
orotidine 5'-phosphate decarboxylase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_52
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58678..59763)
DNA (1086bp) protein (362aa)
bacterial peptide chain release factor 1 (brf-1) id=2106695 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
peptide chain release factor 1 Tax=GWE2_Bacteroidetes_40_63_curated
peptide chain release factor 1
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_53
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59787..61079)
DNA (1293bp) protein (431aa)
phosphoribosylformylglycinamidine cyclO-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=GWE2_Bacteroidetes_40_63_curated
phosphoribosylformylglycinamidine cyclO-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase id=2106693 bin=GWE2_Bacteroidetes_40_63 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_54
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61095..61595)
DNA (501bp) protein (167aa)
redoxin domain-containing protein; K11065 thiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15] Tax=GWE2_Bacteroidetes_40_63_curated
Probable thiol peroxidase id=4638033 bin=GWF2_Bacteroidetes_40_13 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
redoxin domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_55
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61764..63752)
DNA (1989bp) protein (663aa)
outer membrane protein OmpA family protein; K03640 peptidoglycan-associated lipoprotein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=2007880 bin=GWD2_Bacteroidetes_40_43 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_56
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63898..65049)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein id=2007882 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
group 1 glycosyl transferase Tax=GWE2_Bacteroidetes_40_63_curated
glycosyl transferase family 1
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_57
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65624..66301
DNA (678bp) protein (226aa)
B558 family succinate dehydrogenase (Or fumarate reductase) cytochrome B subunit id=2007884 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; K00241 succinate dehydrogenase cytochrome b556 subunit Tax=GWE2_Bacteroidetes_40_63_curated
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_58
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66362..68302
DNA (1941bp) protein (647aa)
succinate dehydrogenase or fumarate reductase, flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=GWE2_Bacteroidetes_40_63_curated
sdhA; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit id=4876560 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_59
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68341..68457
DNA (117bp) protein (39aa)
id=2007888 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2007888 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_200_60
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68475..69236
DNA (762bp) protein (254aa)
ferredoxin; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=GWE2_Bacteroidetes_40_63_curated
Succinate dehydrogenase and fumarate reductase iron-sulfur protein id=2007889 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ferredoxin
Displaying items 31-60 of 62 in total

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