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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79

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Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..418)
DNA (417bp) protein (139aa)
Putative uncharacterized protein id=1871639 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

858..1442
DNA (585bp) protein (195aa)
id=1871638 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1871638 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1478..2419
DNA (942bp) protein (314aa)
id=1871637 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1871637 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2422..4731
DNA (2310bp) protein (770aa)
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor id=1871636 bin=GWD2_Bacteroidetes_40_43 species=Desulfotignum balticum genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
TonB-dependent receptor plug
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4754..5821
DNA (1068bp) protein (356aa)
id=4083663 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
id=4083663 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6083..8338
DNA (2256bp) protein (752aa)
Uncharacterized protein id=1871634 bin=GWD2_Bacteroidetes_40_43 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8456..10525)
DNA (2070bp) protein (690aa)
celD; glucan 1,4-beta-glucosidase (EC:3.2.1.74); K01188 beta-glucosidase [EC:3.2.1.21] Tax=GWE2_Bacteroidetes_40_63_curated
beta-glucosidase id=1871633 bin=GWD2_Bacteroidetes_40_43 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
celD; beta-glucosidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10562..10720
DNA (159bp) protein (53aa)
id=1871632 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1871632 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10810..12231)
DNA (1422bp) protein (474aa)
D-xylose transporter XylE id=4083669 bin=GWF2_Bacteroidetes_40_13 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
sugar transporter; K08138 MFS transporter, SP family, xylose:H+ symportor Tax=GWE2_Bacteroidetes_40_63_curated
sugar transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12243..13571)
DNA (1329bp) protein (443aa)
Xylose isomerase id=1871630 bin=GWD2_Bacteroidetes_40_43 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
xylose isomerase Tax=GWE2_Bacteroidetes_40_63_curated
xylose isomerase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13601..15094)
DNA (1494bp) protein (498aa)
xylulose kinase; K00854 xylulokinase [EC:2.7.1.17] Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1871628 bin=GWD2_Bacteroidetes_40_43 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
carbohydrate kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15497..16435
DNA (939bp) protein (313aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) Tax=GWE2_Bacteroidetes_40_63_curated
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase id=1871626 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


16616..17194
DNA (579bp) protein (193aa)
50S ribosomal protein L25/general stress protein Ctc id=4083677 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=GWE2_Bacteroidetes_40_63_curated
50S ribosomal protein L25
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17201..17764
DNA (564bp) protein (188aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29) Tax=GWE2_Bacteroidetes_40_63_curated
Peptidyl-tRNA hydrolase id=3946115 bin=GWC2_Bacteroidetes_40_13 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
peptidyl-tRNA hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17821..20310)
DNA (2490bp) protein (830aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1871620 bin=GWD2_Bacteroidetes_40_43 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20567..20956
DNA (390bp) protein (130aa)
Heat shock protein 15 id=4083683 bin=GWF2_Bacteroidetes_40_13 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hslR; heat shock protein 15; K04762 ribosome-associated heat shock protein Hsp15 Tax=GWE2_Bacteroidetes_40_63_curated
RNA-binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20931..21446
DNA (516bp) protein (172aa)
id=1871617 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1871617 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21540..22790
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit id=1871615 bin=GWD2_Bacteroidetes_40_43 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
efflux transporter, rnd family, mfp subunit Tax=GWE2_Bacteroidetes_40_63_curated
efflux transporter, rnd family, mfp subunit
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22792..24111
DNA (1320bp) protein (440aa)
Macrolide export ATP-binding/permease protein MacB id=1871613 bin=GWD2_Bacteroidetes_40_43 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
antimicrobial peptide ABC transporter permease Tax=GWE2_Bacteroidetes_40_63_curated
antimicrobial peptide ABC transporter permease
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24121..25602
DNA (1482bp) protein (494aa)
outer membrane efflux protein id=1871611 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
outer membrane protein TolC Tax=GWE2_Bacteroidetes_40_63_curated
membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25649..25810)
DNA (162bp) protein (54aa)
Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25872..26093)
DNA (222bp) protein (74aa)
hypothetical protein
hypothetical protein AnHS1_00050 id=4083755 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein AnHS1_00050 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26250..28664
DNA (2415bp) protein (805aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit Tax=GWE2_Bacteroidetes_40_63_curated
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit id=1871606 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
transketolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28691..31123)
DNA (2433bp) protein (811aa)
wzc; tyrosine-protein kinase (EC:2.7.10.1); K08252 receptor protein-tyrosine kinase [EC:2.7.10.1] Tax=GWE2_Bacteroidetes_40_63_curated
wzc; tyrosine-protein kinase (EC:2.7.10.1)
Protein involved in gliding motility EpsB id=1871603 bin=GWD2_Bacteroidetes_40_43 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31125..31904)
DNA (780bp) protein (260aa)
polysaccharide export protein id=1871600 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
wza; polysaccharide exporter lipoprotein precursor Wza Tax=GWE2_Bacteroidetes_40_63_curated
polysaccharide export outer membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32122..38421
DNA (6300bp) protein (2100aa)
fibronectin type iii domain protein Tax=GWE2_Bacteroidetes_40_63_curated
CHU large protein id=1871597 bin=GWD2_Bacteroidetes_40_43 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
fibronectin type iii domain protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38464..38754
DNA (291bp) protein (97aa)
id=1871549 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1871549 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38763..39377
DNA (615bp) protein (205aa)
Chaperonin GroEL id=1871547 bin=GWD2_Bacteroidetes_40_43 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Exosortase EpsH-like protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39418..40008
DNA (591bp) protein (197aa)
putative transcriptional regulator id=1871545 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
putative transcriptional regulator; K07735 putative transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_79_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39989..40858)
DNA (870bp) protein (290aa)
class IV aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWE2_Bacteroidetes_40_63_curated
class IV aminotransferase id=1871543 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
class IV aminotransferase
Displaying items 1-30 of 164 in total

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