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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_20

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 16311..16826

Top 3 Functional Annotations

Value Algorithm Source
Putative extracytoplasmic function alternative sigma factor id=1771984 bin=GWD2_Bacteroidetes_40_43 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 172.0
  • Bit_score: 339
  • Evalue 2.00e-90
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 339
  • Evalue 2.80e-90
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 172.0
  • Bit_score: 134
  • Evalue 2.10e-29

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGACCACCGATGAGTTTAAAACAAAAGTATTTAGTTTGAAAGATCGGCTGTACCGTTTTTCGAAACGGATGCTGAACGATGAGGTAGAAGCCCAGGATGTAGTTCAGGATGTGTTGATGAAGCTTTGGAGCCAAAAAGAGGAACTTTATAAATGCCAGAGTATTGAAGCCTTTGCCATGACCATGGTGAAAAACCGGAGTTTGGATAAAACCCGGCAGAAAACAAACCGGTTTGCCAAATCAGAAATACTGAAACAGCAATTCGAGACCGTTGATTACGGAAATACCTACGAGCAAAAGGAGATGGGAATGATTGTGCGTGAAATTATCGGACAACTGGATGAACCCCAAAAAACGATCATTCATTTGCGTGATATTGAAGAATATGAATTTGATGAGATTGCCCCTTTGGTGAACATGAATGTGGAAACCATTCGGGTGAATCTTTCGAGGGCCAGGAAAAAAGTTAGAGAAGAATTTAAAAACCGGATGAACTATGGGACCAATGAATTATAA
PROTEIN sequence
Length: 172
MTTDEFKTKVFSLKDRLYRFSKRMLNDEVEAQDVVQDVLMKLWSQKEELYKCQSIEAFAMTMVKNRSLDKTRQKTNRFAKSEILKQQFETVDYGNTYEQKEMGMIVREIIGQLDEPQKTIIHLRDIEEYEFDEIAPLVNMNVETIRVNLSRARKKVREEFKNRMNYGTNEL*