ggKbase home page

RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1214)
DNA (1212bp) protein (404aa)
glycosidase Tax=GWE2_Bacteroidetes_40_63_curated
glycosidase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1371..1778
DNA (408bp) protein (136aa)
OsmC/Ohr family protein id=4310893 bin=GWF2_Bacteroidetes_40_13 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
OsmC family protein Tax=GWE2_Bacteroidetes_40_63_curated
OsmC family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1811..2584
DNA (774bp) protein (258aa)
short-chain dehydrogenase/reductase SDR id=4310892 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein Tax=GWE2_Bacteroidetes_40_63_curated
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2654..3535)
DNA (882bp) protein (294aa)
Malonyl CoA-acyl carrier protein transacylase id=1772047 bin=GWD2_Bacteroidetes_40_43 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
malonyl CoA-acyl carrier protein transacylase Tax=GWE2_Bacteroidetes_40_63_curated
malonyl CoA-acyl carrier protein transacylase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3625..5331)
DNA (1707bp) protein (569aa)
oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=GWE2_Bacteroidetes_40_63_curated
Oligoendopeptidase, M3 family id=1885096 bin=GWE2_Bacteroidetes_40_63 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
oligoendopeptidase F
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5568..5996)
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=1772042 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6136..6864)
DNA (729bp) protein (243aa)
Heat shock protein DnaJ domain protein id=1772040 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
heat shock protein dnaj domain protein; K05801 DnaJ like chaperone protein Tax=GWE2_Bacteroidetes_40_63_curated
molecular chaperone DnaJ
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6868..7482)
DNA (615bp) protein (205aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=GWE2_Bacteroidetes_40_63_curated
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase id=1772038 bin=GWD2_Bacteroidetes_40_43 species=Weeksella virosa genus=Weeksella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7479..8474)
DNA (996bp) protein (332aa)
Putative uncharacterized protein id=1772036 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8617..8922)
DNA (306bp) protein (102aa)
preprotein translocase, YajC subunit id=1885085 bin=GWE2_Bacteroidetes_40_63 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein; K03210 preprotein translocase subunit YajC Tax=GWE2_Bacteroidetes_40_63_curated
preprotein translocase subunit YajC
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8956..9417)
DNA (462bp) protein (154aa)
Putative uncharacterized protein id=1885083 bin=GWE2_Bacteroidetes_40_63 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9489..10430)
DNA (942bp) protein (314aa)
Putative uncharacterized protein id=1772030 bin=GWD2_Bacteroidetes_40_43 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
nusb antitermination factor; K03625 N utilization substance protein B Tax=GWE2_Bacteroidetes_40_63_curated
nitrogen utilization protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10644..10994
DNA (351bp) protein (117aa)
PUR-alpha/beta/gamma DNA/RNA-binding protein id=1772027 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
PUR-alpha/beta/gamma DNA/RNA-binding protein Tax=GWE2_Bacteroidetes_40_63_curated
PUR-alpha/beta/gamma DNA/RNA-binding protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11022..11324)
DNA (303bp) protein (101aa)
Stress responsive alpha-beta barrel domain protein id=1772025 bin=GWD2_Bacteroidetes_40_43 species=Methanococcus maripaludis genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
stress responsive alpha-beta barrel domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
stress responsive A/B barrel domain protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11431..11724)
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=1772023 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11714..12490)
DNA (777bp) protein (259aa)
Uncharacterized protein id=4223448 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12839..15325
DNA (2487bp) protein (829aa)
Ferrous iron transport protein B id=1885069 bin=GWE2_Bacteroidetes_40_63 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
ferrous iron transport protein b; K04759 ferrous iron transport protein B Tax=GWE2_Bacteroidetes_40_63_curated
ferrous iron transport protein b
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15427..15615
DNA (189bp) protein (63aa)
id=1771986 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1771986 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15605..16147)
DNA (543bp) protein (181aa)
id=1771985 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1771985 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16311..16826
DNA (516bp) protein (172aa)
Putative extracytoplasmic function alternative sigma factor id=1771984 bin=GWD2_Bacteroidetes_40_43 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated
RNA polymerase sigma-70 factor
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16807..17289
DNA (483bp) protein (161aa)
id=1771983 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1771983 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17313..17834
DNA (522bp) protein (174aa)
Putative uncharacterized protein id=1771982 bin=GWD2_Bacteroidetes_40_43 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17857..18348
DNA (492bp) protein (164aa)
Putative uncharacterized protein id=1771980 bin=GWD2_Bacteroidetes_40_43 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18425..18979)
DNA (555bp) protein (185aa)
Uncharacterized protein id=1771977 bin=GWD2_Bacteroidetes_40_43 species=Parabacteroides goldsteinii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18992..20197)
DNA (1206bp) protein (402aa)
L-serine ammonia-lyase id=1771975 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
serine dehydratase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20240..21589)
DNA (1350bp) protein (450aa)
MATE efflux family protein id=1771973 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
MATE efflux family protein Tax=GWE2_Bacteroidetes_40_63_curated
Multi antimicrobial extrusion protein (Na(+)/drug antiporter)
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21692..22645)
DNA (954bp) protein (318aa)
tRNA-dihydrouridine synthase id=1771970 bin=GWD2_Bacteroidetes_40_43 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
dus; tRNA-dihydrouridine synthase Dus Tax=GWE2_Bacteroidetes_40_63_curated
dus; tRNA-dihydrouridine synthase Dus
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22841..23509)
DNA (669bp) protein (223aa)
Membrane protein involved in aromatic hydrocarbon degradation id=4310818 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
aromatic hydrocarbon degradation membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23460..24431)
DNA (972bp) protein (324aa)
Membrane protein involved in aromatic hydrocarbon degradation id=4310813 bin=GWF2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
aromatic hydrocarbon degradation membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
aromatic hydrocarbon degradation membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_707_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24749..25339
DNA (591bp) protein (197aa)
hypothetical protein AtheD1_17297 id=1940123 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy