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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_26

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 39888..40445

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family id=1872040 bin=GWD2_Bacteroidetes_40_43 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 186.0
  • Bit_score: 361
  • Evalue 4.00e-97
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 361
  • Evalue 5.60e-97
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 186.0
  • Bit_score: 141
  • Evalue 1.80e-31

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGGATAACCATTATGTAAAGCGGGTTACAGAGGGCGATACTGAAGCTTTCCGGTTTCTGGTTGAAAAATACCAGAACCGGGCGCTCTCAACCGCTTACAGAGTGATAAAAGACCGGGATTTGGCCGAAGATATTGTGCAGGAATCCTTTATAAAAGCCTACAAAAATCTGAGGACTTTCCGGGGCGATGCCTCTTTTGCAACCTGGTTTTTACGCATTGTAGTGAATGAATCGATACGGCACATCCGCCGAAAGAAGCTGGAGACAGCTTATACCCAGGAAACCCTTTCAATCAACGAAGTGGAGATGAACAATAGTCTCAAAACCATGAAAGAAAAGGAACAACGCCGATTTATCGATAAAGCCATGCATCAACTGCCACCCCGCGAGGCGTTGGTACTCCAGCTTTTCTACATCGACGATTTAAGCCTCAAGGAGATGGAAGAGGTGATGGAATTAAAAGCAGATCACCTGAAAGTATTGTTACATAGGGCCCGCAAGAGTATCTTCACCATCTTGCAAACAGAATTGAAACACGAATTAATTTCATTGTTATGA
PROTEIN sequence
Length: 186
MDNHYVKRVTEGDTEAFRFLVEKYQNRALSTAYRVIKDRDLAEDIVQESFIKAYKNLRTFRGDASFATWFLRIVVNESIRHIRRKKLETAYTQETLSINEVEMNNSLKTMKEKEQRRFIDKAMHQLPPREALVLQLFYIDDLSLKEMEEVMELKADHLKVLLHRARKSIFTILQTELKHELISLL*