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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(253..2358)
DNA (2106bp) protein (702aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=GWE2_Bacteroidetes_40_63_curated
ATP-dependent DNA helicase RecG id=1872140 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ATP-dependent DNA helicase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2791..3234
DNA (444bp) protein (148aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=GWE2_Bacteroidetes_40_63_curated
Nucleoside diphosphate kinase id=1872137 bin=GWD2_Bacteroidetes_40_43 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
nucleoside diphosphate kinase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3322..3984)
DNA (663bp) protein (221aa)
YceI family protein id=1872134 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides coprosuis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
YceI like family protein Tax=GWE2_Bacteroidetes_40_63_curated
rhodanese-like domain protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4222..11835)
DNA (7614bp) protein (2538aa)
EF hand domain/PKD domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
Outer membrane adhesin like proteiin id=4083045 bin=GWF2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
outer membrane adhesin-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11870..14959)
DNA (3090bp) protein (1030aa)
filamentous hemagglutinin outer membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=1949400 bin=GWE2_Bacteroidetes_40_63 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
fibronectin type III domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15240..15947
DNA (708bp) protein (236aa)
id=1872129 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1872129 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15960..16646
DNA (687bp) protein (229aa)
id=1872128 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1872128 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16755..17189)
DNA (435bp) protein (145aa)
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=GWE2_Bacteroidetes_40_63_curated
NUDIX hydrolase id=1872127 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
NUDIX hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17186..17290)
DNA (105bp) protein (35aa)
id=1872126 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1872126 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17304..18086)
DNA (783bp) protein (261aa)
Cell wall-associated hydrolase, invasion-associated protein id=1872125 bin=GWD2_Bacteroidetes_40_43 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
cell wall-associated hydrolase Tax=GWE2_Bacteroidetes_40_63_curated
cell wall-associated hydrolase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18299..20419
DNA (2121bp) protein (707aa)
putative domain HDIG-containing protein; K07037 Tax=GWE2_Bacteroidetes_40_63_curated
putative transmembrane HD family protein id=1872124 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
transmembrane HD family protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20457..23810)
DNA (3354bp) protein (1118aa)
Serine/threonine protein kinases id=4083060 bin=GWF2_Bacteroidetes_40_13 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
protein serine/threonine phosphatase Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23870..27949)
DNA (4080bp) protein (1360aa)
A540L (Fragment) id=1872122 bin=GWD2_Bacteroidetes_40_43 species=uncultured bacterium pFosLip genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27951..29948)
DNA (1998bp) protein (666aa)
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
Conserved repeat domain protein id=1949412 bin=GWE2_Bacteroidetes_40_63 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30238..30633
DNA (396bp) protein (132aa)
Methyl-accepting chemotaxis sensory transducer id=1872068 bin=GWD2_Bacteroidetes_40_43 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
methyl-accepting chemotaxis sensory transducer; K07216 hemerythrin Tax=GWE2_Bacteroidetes_40_63_curated
Methyl-accepting chemotaxis protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30785..31480
DNA (696bp) protein (232aa)
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain id=1949414 bin=GWE2_Bacteroidetes_40_63 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
two-component system response regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=GWE2_Bacteroidetes_40_63_curated
ArsR family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31901..33994
DNA (2094bp) protein (698aa)
vitamin B12 receptor; K02014 iron complex outermembrane recepter protein Tax=GWE2_Bacteroidetes_40_63_curated
vitamin B12 receptor id=1872061 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ligand-gated channel protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34117..34575)
DNA (459bp) protein (153aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78) Tax=GWE2_Bacteroidetes_40_63_curated
6,7-dimethyl-8-ribityllumazine synthase id=4083141 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
6,7-dimethyl-8-ribityllumazine synthase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34685..35374)
DNA (690bp) protein (230aa)
Putative uncharacterized protein id=1872055 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tetratricopeptide repeat-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35630..36379
DNA (750bp) protein (250aa)
LytTR family two component transcriptional regulator id=1872052 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator Tax=GWE2_Bacteroidetes_40_63_curated
LytTR family two component transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36673..36768
DNA (96bp) protein (32aa)
id=1872051 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1872051 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36782..37912
DNA (1131bp) protein (377aa)
DNA replication and repair protein RecF id=1872049 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
DNA replication and repair protein; K03629 DNA replication and repair protein RecF Tax=GWE2_Bacteroidetes_40_63_curated
DNA recombination protein RecF
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37884..38174
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=1872046 bin=GWD2_Bacteroidetes_40_43 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38339..39250)
DNA (912bp) protein (304aa)
Putative cadmium, cobalt and zinc/H(+)-K(+) antiporter id=1872044 bin=GWD2_Bacteroidetes_40_43 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
putative cadmium, cobalt and zinc/H(+)-K(+) antiporter; K03295 cation efflux system protein, CDF family Tax=GWE2_Bacteroidetes_40_63_curated
cobalt transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39516..39884
DNA (369bp) protein (123aa)
Putative uncharacterized protein id=1872042 bin=GWD2_Bacteroidetes_40_43 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
membrane protein Tax=GWE2_Bacteroidetes_40_63_curated
membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39888..40445
DNA (558bp) protein (186aa)
RNA polymerase sigma factor, sigma-70 family id=1872040 bin=GWD2_Bacteroidetes_40_43 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated
RNA polymerase ECF-type sigma factor
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40442..40807
DNA (366bp) protein (122aa)
id=1872039 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=1872039 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40876..41910
DNA (1035bp) protein (345aa)
Phosphoesterase RecJ domain protein id=1872037 bin=GWD2_Bacteroidetes_40_43 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
phosphoesterase recj domain protein; K06881 phosphoesterase RecJ domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
phosphoesterase recj domain-containing protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41903..42439
DNA (537bp) protein (179aa)
FKBP-type peptidylprolyl isomerase id=4083152 bin=GWF2_Bacteroidetes_40_13 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
FKBP-type peptidylprolyl isomerase Tax=GWE2_Bacteroidetes_40_63_curated
FKBP-type peptidylprolyl isomerase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_127_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42454..43368
DNA (915bp) protein (305aa)
Peptidyl-prolyl cis-trans isomerase id=1872033 bin=GWD2_Bacteroidetes_40_43 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=GWE2_Bacteroidetes_40_63_curated
peptidylprolyl isomerase
Displaying items 1-30 of 71 in total

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