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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_10

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: 7655..8155

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=2008038 bin=GWD2_Bacteroidetes_40_43 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 331
  • Evalue 4.00e-88
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 331
  • Evalue 7.30e-88
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 164.0
  • Bit_score: 156
  • Evalue 6.50e-36

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 501
GTGAGCAGCGACGAGGCCATAATAAAAATAAAGGAGTTTCAGCCATTGATCCGCAAAGTGTGTTTGATGTATGCCCAAAACAGGGCAGAGTCGGACGATATGTTTCAGGAGATTTGTATCCAGGTATGGCGGGCGTATCCTCAGTTTAAGGGCGATTCGAAGTTTTCCACGTGGCTATACCGGGTCTCTATTAACACGGCTATTTCGTGGATTCGGAAGGAGAAAAAGCACCGGCTGAATGACCGGGATGACGAAAAGCTTTTTGGCATGCACGACGATACCCCGTTTTACGTGGCCGAGGAAAAGGTGGAGCTGGTGGCATCGCTGCACCGGGCTATTCAAAAGCTTAGCGATGTGGACCGTTCGCTGGTGTTGTTGTATCTCGAAGATGTGGCTTATGCTGAAATTTCGGAGATTTTAGGTCTGACAGTGACGAATATTAAGGTAAAAATGAACCGGGTGAAGAAACGGTTAAAAAAGCTGATTGAAGATGATGAATGA
PROTEIN sequence
Length: 167
VSSDEAIIKIKEFQPLIRKVCLMYAQNRAESDDMFQEICIQVWRAYPQFKGDSKFSTWLYRVSINTAISWIRKEKKHRLNDRDDEKLFGMHDDTPFYVAEEKVELVASLHRAIQKLSDVDRSLVLLYLEDVAYAEISEILGLTVTNIKVKMNRVKKRLKKLIEDDE*