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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_1
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2..85
DNA (84bp) protein (28aa)
30S ribosomal protein S16 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

97..618
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM id=2008030 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides plebeius genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=GWE2_Bacteroidetes_40_63_curated
rimM; 16S rRNA processing protein RimM
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_3
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(866..2746)
DNA (1881bp) protein (627aa)
polysaccharide biosynthesis protein CapD Tax=GWE2_Bacteroidetes_40_63_curated
Polysaccharide biosynthesis protein CapD id=4413198 bin=GWA2_Bacteroidetes_40_14 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
polysaccharide biosynthesis protein CapD
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_4
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2914..3084)
DNA (171bp) protein (57aa)
Uncharacterized protein id=4876633 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
4Fe-4S binding domain. Tax=GWE2_Bacteroidetes_40_63_curated
4Fe-4S binding domain.
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_5
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3196..3663)
DNA (468bp) protein (156aa)
phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=GWE2_Bacteroidetes_40_63_curated
phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme id=2008033 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_6
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3878..4690)
DNA (813bp) protein (271aa)
Phosphatidate cytidylyltransferase id=4638296 bin=GWF2_Bacteroidetes_40_13 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
CDP-diglyceride synthetase Tax=GWE2_Bacteroidetes_40_63_curated
CDP-diglyceride synthetase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4693..4890)
DNA (198bp) protein (66aa)
Putative uncharacterized protein id=2008035 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_8
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4911..6962)
DNA (2052bp) protein (684aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=GWE2_Bacteroidetes_40_63_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH id=4413247 bin=GWA2_Bacteroidetes_40_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_9
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6976..7341)
DNA (366bp) protein (122aa)
Iojap-like ribosome-associated protein id=4876665 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
iojap family protein Tax=GWE2_Bacteroidetes_40_63_curated
iojap-like protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7655..8155
DNA (501bp) protein (167aa)
RNA polymerase ECF-type sigma factor id=2008038 bin=GWD2_Bacteroidetes_40_43 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated
RNA polymerase ECF-type sigma factor
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8145..8774
DNA (630bp) protein (210aa)
id=2008039 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2008039 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_12
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8781..9503)
DNA (723bp) protein (241aa)
Uncharacterized protein id=4638304 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
methyltransferase Tax=GWE2_Bacteroidetes_40_63_curated
putative methyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_13
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9503..11962)
DNA (2460bp) protein (820aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01775 alanine racemase [EC:5.1.1.1] Tax=GWE2_Bacteroidetes_40_63_curated
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase id=2008042 bin=GWD2_Bacteroidetes_40_43 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11974..14298)
DNA (2325bp) protein (775aa)
protein serine/threonine phosphatase Tax=GWE2_Bacteroidetes_40_63_curated
Serine/threonine protein kinases id=2106473 bin=GWE2_Bacteroidetes_40_63 species=uncultured Cytophagia bacterium genus=unknown taxon_order=unknown taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
protein serine/threonine phosphatase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_15
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14380..14955)
DNA (576bp) protein (192aa)
thymidine kinase (EC:2.7.1.21) Tax=GWE2_Bacteroidetes_40_63_curated
thymidine kinase (EC:2.7.1.21)
Thymidine kinase id=4638388 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15076..16053
DNA (978bp) protein (326aa)
hypothetical protein MsalJ2_14213 id=2008049 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16062..16769
DNA (708bp) protein (236aa)
methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWE2_Bacteroidetes_40_63_curated
Ribosomal RNA small subunit methyltransferase I id=4638390 bin=GWF2_Bacteroidetes_40_13 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
methyltransferase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16887..17642
DNA (756bp) protein (252aa)
Response regulator id=2106469 bin=GWE2_Bacteroidetes_40_63 species=Flavobacteriales bacterium ALC-1 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator Tax=GWE2_Bacteroidetes_40_63_curated
LytTR family two component transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_19
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17868..18176
DNA (309bp) protein (103aa)
Transcriptional regulator, ArsR family id=2008055 bin=GWD2_Bacteroidetes_40_43 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
ArsR family transcriptional regulator Tax=GWE2_Bacteroidetes_40_63_curated
ArsR family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_20
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18233..20083)
DNA (1851bp) protein (617aa)
alpha amylase Tax=GWE2_Bacteroidetes_40_63_curated
Putative uncharacterized protein id=4638393 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
alpha-amlyase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_21
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20131..20859)
DNA (729bp) protein (243aa)
Phospholipase/Carboxylesterase id=4638394 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
phospholipase/carboxylesterase Tax=GWE2_Bacteroidetes_40_63_curated
phospholipase/carboxylesterase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_22
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21135..22511)
DNA (1377bp) protein (459aa)
LPXTG-motif cell wall anchor domain-containing protein id=2008064 bin=GWD2_Bacteroidetes_40_43 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
1,4-alpha-glucan-branching protein Tax=GWE2_Bacteroidetes_40_63_curated
1,4-alpha-glucan-branching protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22627..24936)
DNA (2310bp) protein (770aa)
trehalose/maltose hydrolase or phosphorylase Tax=GWE2_Bacteroidetes_40_63_curated
Trehalose/maltose hydrolase or phosphorylase id=4638398 bin=GWF2_Bacteroidetes_40_13 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
trehalose/maltose hydrolase or phosphorylase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25076..25723)
DNA (648bp) protein (216aa)
beta-phosphoglucomutase id=4638400 bin=GWF2_Bacteroidetes_40_13 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
beta-phosphoglucomutase Tax=GWE2_Bacteroidetes_40_63_curated
beta-phosphoglucomutase
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_25
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25743..27080)
DNA (1338bp) protein (446aa)
Transporter, major facilitator family id=2008073 bin=GWD2_Bacteroidetes_40_43 species=Cellvibrio japonicus genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
major facilitator family transporter Tax=GWE2_Bacteroidetes_40_63_curated
major facilitator family transporter
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27369..28388)
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family id=4876682 bin=GWC2_Bacteroidetes_40_13 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
transcriptional regulator, laci family Tax=GWE2_Bacteroidetes_40_63_curated
LacI family transcriptional regulator
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_27
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28649..31639
DNA (2991bp) protein (997aa)
SusC/RagA family TonB-linked outer membrane protein id=2008102 bin=GWD2_Bacteroidetes_40_43 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_40_63_curated
TonB-linked outer membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_28
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31651..33255
DNA (1605bp) protein (535aa)
RagB/SusD domain-containing protein Tax=GWE2_Bacteroidetes_40_63_curated
RagB/SusD domain-containing protein id=2008103 bin=GWD2_Bacteroidetes_40_43 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
membrane protein
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_29
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33274..34440
DNA (1167bp) protein (389aa)
id=2008104 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
id=2008104 Tax=GWE2_Bacteroidetes_40_63_curated
RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_334_30
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34791..37760
DNA (2970bp) protein (990aa)
TonB-dependent receptor plug id=2008105 bin=GWD2_Bacteroidetes_40_43 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
TonB-dependent receptor plug Tax=GWE2_Bacteroidetes_40_63_curated
TonB-dependent receptor plug
Displaying items 1-30 of 32 in total

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