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RIFOXYC2_FULL_Bacteroidetes_40_12_rifoxyc2_full_scaffold_513_2

Organism: Bacteroidetes bacterium RIFOXYC2_FULL_40_12

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38
Location: comp(492..1082)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 id=2008111 bin=GWD2_Bacteroidetes_40_43 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 383
  • Evalue 1.00e-103
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE2_Bacteroidetes_40_63_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 383
  • Evalue 1.50e-103
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 190.0
  • Bit_score: 237
  • Evalue 4.50e-60

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Taxonomy

GWE2_Bacteroidetes_40_63_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGAATTTTCATAATCTTGATGATTATGATTTGATTAAGCAATATCTTGGTGGACAATCATCCAGCCTTGAAATCTTAATAAATCGTCATAAAAATAAAGTCTATTCGTATATCCTGATGGTGGTTAAAAACCGCGAATTAGCCGAGGATATATTCCAGGATACTTTTATAAAAGTCATCCGTTCGCTGCATTCAGGCACTTACAAAGAAGAGGGAAGGTTTGTTTCGTGGGTCATGCGGATTGCCCATAACCTGATCATCGATTTTTACCGTAAAGAAAAGCATCTGAAAGTAGTTTCGAGCGATGATTCTGAAGTCCCGTTGTTAAATTCTTCAAAGTTTTCGGACTTGACCGTCGAGGAATCTTTGGTAAATTTTCAAATCAACAGTGATGTAAAAAAGTTGGTGGAAAAGTTGCCCGAGGAGCAAAAAGAAGTGATCATGCTCCGTTTTTATTTCGACATGAGCTTTAAGGAAATTGCCGAACAAACTCAAGTTAGCATCAATACCGCACTTGGCCGGATGAGGTATGCAATAATCAACCTTAGGAAGTTGATGGAGGCATCTCATGTAGATCTGGCTATTAAGTAA
PROTEIN sequence
Length: 197
MNFHNLDDYDLIKQYLGGQSSSLEILINRHKNKVYSYILMVVKNRELAEDIFQDTFIKVIRSLHSGTYKEEGRFVSWVMRIAHNLIIDFYRKEKHLKVVSSDDSEVPLLNSSKFSDLTVEESLVNFQINSDVKKLVEKLPEEQKEVIMLRFYFDMSFKEIAEQTQVSINTALGRMRYAIINLRKLMEASHVDLAIK*